Factsheet for HORVU1Hr1G040160.10

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G040180.1	Barley	cytosol, nucleus	42.16	84.48
TraesCS1B01G169200.1	Wheat	mitochondrion	54.05	72.12
TraesCS1D01G148600.1	Wheat	mitochondrion	54.59	71.29
TraesCS1A01G151600.1	Wheat	mitochondrion	48.65	63.68
Os10t0472400-01	Rice	cytosol	32.25	61.51
GSMUA_Achr5P12910_001	Banana	cytosol	26.67	58.73
VIT_07s0005g06420.t01	Wine grape	cytosol	27.21	54.51
KXG38351	Sorghum	mitochondrion	32.97	54.46
PGSC0003DMT400045523	Potato	cytosol	26.13	52.92
KRG99787	Soybean	cytosol	26.49	52.69
Solyc09g061310.2.1	Tomato	cytosol	26.13	52.54
Zm00001d014043_P001	Maize	mitochondrion	29.37	50.62
Bra040360.1-P	Field mustard	cytosol	21.8	50.0
KRH46754	Soybean	cytosol	25.05	49.64
CDY34915	Canola	cytosol	22.16	49.6
CDY66750	Canola	cytosol	21.98	49.39
Bra029621.1-P	Field mustard	cytosol	24.14	48.91
AT3G07090.1	Thale cress	cytosol	23.24	48.68
GSMUA_Achr4P26480_001	Banana	cytosol, mitochondrion, plasma membrane	26.67	47.59
CDX82731	Canola	cytosol, extracellular, plastid	4.68	43.33
CDY65594	Canola	cytosol, extracellular, plastid	7.93	42.72
CDY05315	Canola	mitochondrion	23.96	41.18
CDY65492	Canola	cytosol	7.21	39.22

Protein Annotations

EnsemblPlants:HORVU1Hr1G040160.10	EnsemblPlantsGene:HORVU1Hr1G040160	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	PANTHER:PTHR12378	PANTHER:PTHR12378:SF16
PFAM:PF05903	SEG:seg	SMART:SM01179	UniParc:UPI000B47A19A	UniProt:A0A287F870	MapMan:19.2.3.2.5
MapMan:19.4.1.7	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:284360257..284412275

Molecular Weight (calculated)

60336.9 Da

IEP (calculated)

9.712

GRAVY (calculated)

-0.473

Length

555 amino acids

Sequence
(BLAST)

001: PHLARTGSFH DTRERQCCGS FKFLQGTEKK GKDDEGIPSE SESTPAWLRH VRARWMEFAR TRRRGRWIKT RPRGRNRGWF CAGQGLDRLW FLCFFLSFLR
101: RGFSSPPTPP VCVRRRGETP AQERKKETKK PKAVESLTST EPTSIPTPWP CFYPTTTPSG ACKLHPTSSD MAKPRRSRSV LARCGCFGGG QARGKVAEDE
201: YPVKLHIYDI SRGMARQLST TVLGKAIEAV WHTGVVVHGK EYYFGGGIQQ GRPGRTPYGT PARVEHFGVT HVAKEDFEGF LQEMSPRYTP ETYNLLTNNC
301: NHFSNEVVKF LVGSTIPSYI LDQPKEAMKS PIGALIMPMI QGLETTLRAG AAIQPPQSVL APAAAAQTQP STKSTPNETA KGEMVSNDSG IIPHVVLPTP
401: KGVGVVQTHP STKNDQIESR SVAANEAGAD EMVDSDCGII PPPAKPATPA AATQTEPSLN SIELQTVDEG TRIITPPAVQ PVAPAAAVAQ VTVPTAATSD
501: PLGEAKNRVQ EELKQEFAAI MATGSVQAGD AAALAMRRVM ERHGLRRTAV PTQQG

Best Arabidopsis Sequence Match ( AT3G07090.1 )
(BLAST)

001: MAEEAHKVTL NVYDLSQGLA RQLSQSLLGK VIEGVWHTGI VVYGNEYFFG GGIQHLPVGR TPYGTPIRTI ELGLSHVPKD VFEMYLEEIS PRYTAESYNL
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFT9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.