CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99787	Soybean	cytosol	86.79	87.1
PGSC0003DMT400045523	Potato	cytosol	67.86	69.34
VIT_07s0005g06420.t01	Wine grape	cytosol	68.57	69.31
GSMUA_Achr5P12910_001	Banana	cytosol	61.79	68.65
Solyc09g061310.2.1	Tomato	cytosol	67.5	68.48
Bra040360.1-P	Field mustard	cytosol	57.86	66.94
CDY34915	Canola	cytosol	58.21	65.73
CDY66750	Canola	cytosol	57.86	65.59
AT3G07090.1	Thale cress	cytosol	60.71	64.15
Bra029621.1-P	Field mustard	cytosol	62.5	63.87
GSMUA_Achr4P26480_001	Banana	cytosol, mitochondrion, plasma membrane	59.64	53.7
CDY05315	Canola	mitochondrion	60.71	52.63
Os10t0472400-01	Rice	cytosol	52.86	50.86
CDY65594	Canola	cytosol, extracellular, plastid	18.21	49.51
CDX82731	Canola	cytosol, extracellular, plastid	10.36	48.33
KXG38351	Sorghum	mitochondrion	57.14	47.62
Zm00001d014043_P001	Maize	mitochondrion	53.57	46.58
CDY65492	Canola	cytosol	16.07	44.12
TraesCS1B01G169200.1	Wheat	mitochondrion	49.64	33.41
HORVU1Hr1G040180.1	Barley	cytosol, nucleus	32.86	33.21
TraesCS1D01G148600.1	Wheat	mitochondrion	49.29	32.47
TraesCS1A01G151600.1	Wheat	mitochondrion	48.57	32.08
HORVU1Hr1G040160.10	Barley	cytosol, nucleus	49.64	25.05

Protein Annotations

EMBL:ACUP02005356	EnsemblPlants:KRH46754	EnsemblPlantsGene:GLYMA_08G354700	EntrezGene:100787486	Gene3D:3.90.1720.30	InterPro:PPPDE_dom
PANTHER:PTHR12378	PANTHER:PTHR12378:SF16	PFAM:PF05903	ProteinID:KRH46754	ProteinID:KRH46754.1	SEG:seg
SMART:SM01179	UniParc:UPI0002337CBA	UniProt:I1KZA2	MapMan:19.2.3.2.5	MapMan:19.4.1.7	:

Description

hypothetical protein

Coordinates

chr8:+:46753878..46756868

Molecular Weight (calculated)

30136.6 Da

IEP (calculated)

6.247

GRAVY (calculated)

-0.326

Length

280 amino acids

Sequence
(BLAST)

001: MAEEGHRVTL NVYDLSQGLA RQLSMSFLGK AIEGIWHTGV VVYGNEYYFG GGIQHSPAGS TPYGTPLRVV DLGVTHVPKD VFEMYLQEIS PQYLPETYSL
101: LTHNCNNFSN EVAQFLVGAS IPEYILQLPN EVMSSPMGAL ILPMIQNLET TLKSGGVPQV PQFKPATTLN VSANTQKNSS TSNSSSENGV SREVNKEVKG
201: KDENSKAAPS ANTTGQPQKP SLNGVTADPL GDARNKVQDE ILKEFAAIMA SGTMRASEAA ALATKRVMQR YGHTTAVSQN

Best Arabidopsis Sequence Match ( AT3G07090.1 )
(BLAST)

001: MAEEAHKVTL NVYDLSQGLA RQLSQSLLGK VIEGVWHTGI VVYGNEYFFG GGIQHLPVGR TPYGTPIRTI ELGLSHVPKD VFEMYLEEIS PRYTAESYNL
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFT9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.