Factsheet for Os10t0472400-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P12910_001	Banana	cytosol	53.61	61.9
Os02t0814000-01	Rice	cytosol	51.89	59.92
KXG38351	Sorghum	mitochondrion	69.07	59.82
VIT_07s0005g06420.t01	Wine grape	cytosol	55.33	58.12
PGSC0003DMT400045523	Potato	cytosol	54.3	57.66
Solyc09g061310.2.1	Tomato	cytosol	53.95	56.88
Zm00001d014043_P001	Maize	mitochondrion	60.82	54.97
KRG99787	Soybean	cytosol	52.58	54.84
KRH46754	Soybean	cytosol	50.86	52.86
AT3G07090.1	Thale cress	cytosol	47.77	52.45
Bra040360.1-P	Field mustard	cytosol	43.3	52.07
Bra029621.1-P	Field mustard	cytosol	48.8	51.82
CDY34915	Canola	cytosol	43.99	51.61
CDY66750	Canola	cytosol	43.64	51.42
GSMUA_Achr4P26480_001	Banana	cytosol, mitochondrion, plasma membrane	53.26	49.84
TraesCS1B01G169200.1	Wheat	mitochondrion	63.23	44.23
CDY65594	Canola	cytosol, extracellular, plastid	15.46	43.69
TraesCS1D01G148600.1	Wheat	mitochondrion	62.54	42.82
TraesCS1A01G151600.1	Wheat	mitochondrion	61.86	42.45
CDY05315	Canola	mitochondrion	47.08	42.41
CDX82731	Canola	cytosol, extracellular, plastid	8.59	41.67
HORVU1Hr1G040180.1	Barley	cytosol, nucleus	38.49	40.43
CDY65492	Canola	cytosol	13.4	38.24
HORVU1Hr1G040160.10	Barley	cytosol, nucleus	61.51	32.25
Os02t0788133-00	Rice	plastid	16.49	32.21

Protein Annotations

EMBL:AK121929	EnsemblPlants:Os10t0472400-01	EnsemblPlantsGene:Os10g0472400	EntrezGene:4348873	Gene3D:3.90.1720.30	InterPro:PPPDE_dom
PANTHER:PTHR12378	PANTHER:PTHR12378:SF16	PFAM:PF05903	ProteinID:ABB47783.1	ProteinID:BAT11265.1	RefSeq:XP_015613113.1
RefSeq:XP_015613114.1	SEG:seg	SMART:SM01179	UniParc:UPI00005E1F1A	UniProt:Q337L1	MapMan:19.2.3.2.5
MapMan:19.4.1.7	:	:	:	:	:

Description

Similar to Thioredoxin. (Os10t0472400-01)

Coordinates

chr10:+:17544776..17547680

Molecular Weight (calculated)

30867.8 Da

IEP (calculated)

5.959

GRAVY (calculated)

-0.196

Length

291 amino acids

Sequence
(BLAST)

001: MADDDYPVKL HIYDLSQGMA RQLSTTILGK AIEAIWHTGV VVYGKEYFFG GGIQKDHPGR TPYGTPVRVE DLGVTHVPRE IFEDFLQDIN PRYTPANYNL
101: LSNNCNNFTN EAAQFLVGSA IPSYILELPN EVMNSPIGAL ILPMIQGLET SLRAGVAPQP PQFKPSPVAA VTATQSPPSG SIHVEPKSTA SDKTEVDNNG
201: GGIPPAVQPA PVAAATSPAA VAEASMAPPP PVDPLREAKS RVQEEIKREF AAIMATGAVQ AGEAAALATR RVMERHGLRR AAVAGGGMQR G

Best Arabidopsis Sequence Match ( AT3G07090.1 )
(BLAST)

001: MAEEAHKVTL NVYDLSQGLA RQLSQSLLGK VIEGVWHTGI VVYGNEYFFG GGIQHLPVGR TPYGTPIRTI ELGLSHVPKD VFEMYLEEIS PRYTAESYNL
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFT9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.