Factsheet for GSMUA_Achr5P12910_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040360.1-P	Field mustard	cytosol	61.9	64.46
GSMUA_Achr4P26480_001	Banana	cytosol, mitochondrion, plasma membrane	78.97	63.99
PGSC0003DMT400045523	Potato	cytosol	69.44	63.87
Solyc09g061310.2.1	Tomato	cytosol	69.84	63.77
CDY66750	Canola	cytosol	62.3	63.56
VIT_07s0005g06420.t01	Wine grape	cytosol	69.84	63.54
CDY34915	Canola	cytosol	62.3	63.31
KRG99787	Soybean	cytosol	69.84	63.08
Bra029621.1-P	Field mustard	cytosol	67.46	62.04
KRH46754	Soybean	cytosol	68.65	61.79
AT3G07090.1	Thale cress	cytosol	64.29	61.13
CDY65594	Canola	cytosol, extracellular, plastid	22.62	55.34
Os10t0472400-01	Rice	cytosol	61.9	53.61
CDY05315	Canola	mitochondrion	66.27	51.7
KXG38351	Sorghum	mitochondrion	66.27	49.7
Zm00001d014043_P001	Maize	mitochondrion	62.3	48.76
CDX82731	Canola	cytosol, extracellular, plastid	11.11	46.67
CDY65492	Canola	cytosol	15.48	38.24
TraesCS1B01G169200.1	Wheat	mitochondrion	60.32	36.54
HORVU1Hr1G040180.1	Barley	cytosol, nucleus	38.89	35.38
TraesCS1D01G148600.1	Wheat	mitochondrion	59.13	35.06
TraesCS1A01G151600.1	Wheat	mitochondrion	58.33	34.67
HORVU1Hr1G040160.10	Barley	cytosol, nucleus	58.73	26.67

Protein Annotations

EnsemblPlants:GSMUA_Achr5P12910_001	EnsemblPlants:GSMUA_Achr5T12910_001	EnsemblPlantsGene:GSMUA_Achr5G12910_001	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	PANTHER:PTHR12378
PANTHER:PTHR12378:SF16	PFAM:PF05903	SMART:SM01179	UniParc:UPI000296F6BC	UniProt:M0SY20	MapMan:19.2.3.2.5
MapMan:19.4.1.7	:	:	:	:	:

Description

PPPDE peptidase domain-containing protein 2 [Source:GMGC_GENE;Acc:GSMUA_Achr5G12910_001]

Coordinates

chr5:-:9215856..9220005

Molecular Weight (calculated)

27866.3 Da

IEP (calculated)

5.147

GRAVY (calculated)

-0.285

Length

252 amino acids

Sequence
(BLAST)

001: MAEDGYKVKL HVYDLSQGLA RQLSMTFLGK VIEAIWHTGL VVYGKEYYFS GGIQQDPAGK TPYGTPIRVV ELGVTHVPEE VFEEYLQEIS ERYTAETYNL
101: LSHNCNNFSN EVAQFLVSTT IPDYILQLPN EVMSSPMGAL ILPMIQRLET TLKSGAVPQA PQFNPVSMTQ TIAPTSVSSS PTKRDASAES EKQPQLAEDP
201: LGDARNKVQE EITREFAAIM ATGTIRASEA AALATRRVME RHGRLNVPMQ RG

Best Arabidopsis Sequence Match ( AT3G07090.1 )
(BLAST)

001: MAEEAHKVTL NVYDLSQGLA RQLSQSLLGK VIEGVWHTGI VVYGNEYFFG GGIQHLPVGR TPYGTPIRTI ELGLSHVPKD VFEMYLEEIS PRYTAESYNL
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFT9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.