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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra040360.1-P Field mustard cytosol 95.16 97.52
CDY66750 Canola cytosol 96.77 97.17
AT3G07090.1 Thale cress cytosol 77.42 72.45
CDY65594 Canola cytosol, extracellular, plastid 27.42 66.02
CDY05315 Canola mitochondrion 83.87 64.4
CDX82731 Canola cytosol, extracellular, plastid 15.32 63.33
GSMUA_Achr5P12910_001 Banana cytosol 63.31 62.3
VIT_07s0005g06420.t01 Wine grape cytosol 67.34 60.29
PGSC0003DMT400045523 Potato cytosol 64.92 58.76
KRH46754 Soybean cytosol 65.73 58.21
Solyc09g061310.2.1 Tomato cytosol 64.52 57.97
KRG99787 Soybean cytosol 64.92 57.71
CDY65492 Canola cytosol 22.18 53.92
GSMUA_Achr4P26480_001 Banana cytosol, mitochondrion, plasma membrane 58.47 46.62
Os10t0472400-01 Rice cytosol 51.61 43.99
Zm00001d014043_P001 Maize mitochondrion 52.82 40.68
KXG38351 Sorghum mitochondrion 53.23 39.29
HORVU1Hr1G040180.1 Barley cytosol, nucleus 35.48 31.77
TraesCS1B01G169200.1 Wheat mitochondrion 49.19 29.33
TraesCS1D01G148600.1 Wheat mitochondrion 48.39 28.24
TraesCS1A01G151600.1 Wheat mitochondrion 47.58 27.83
HORVU1Hr1G040160.10 Barley cytosol, nucleus 49.6 22.16
Protein Annotations
EnsemblPlants:CDY34915EnsemblPlantsGene:GSBRNA2T00057489001Gene3D:3.90.1720.30InterPro:PPPDE_domKEGG:00261+3.4.-.-KEGG:00310+3.4.-.-
KEGG:00550+3.4.-.-KEGG:00780+3.4.-.-PANTHER:PTHR12378PANTHER:PTHR12378:SF16PFAM:PF05903ProteinID:CDY34915
ProteinID:CDY34915.1SMART:SM01179UniParc:UPI0004EE41C8UniProt:A0A078H8V8MapMan:19.2.3.2.5MapMan:19.4.1.7
Description
BnaA01g32460DBnaA01g32460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8V8]
Coordinates
chrLK032343:+:93195..94220
Molecular Weight (calculated)
26949.3 Da
IEP (calculated)
6.247
GRAVY (calculated)
-0.267
Length
248 amino acids
Sequence
(BLAST)
001: MCQEAHKVTL NVYDLSRGLA RQLSASLLGK VIEGVWHTGI VAYGNEYFFG GGIQHLPAGT TPYGAPLRTV EMGETHVPKD VFEMYLEEIS PRYTAESYNL
101: LTHNCNNFSN EVSQFLVGKG IPDYILQLPS EVMNSPMGGL LMPMIQNLEA TLRAGAVPNA PQFKPKSQPV GPNPSEKASE SPVVVQPSAS KEKVKEDPLG
201: DARTKIQEEI TREFASLMAQ GTQGIASEAA TIATKRVMQK YGHLNVSA
Best Arabidopsis Sequence Match ( AT3G07090.1 )
(BLAST)
001: MAEEAHKVTL NVYDLSQGLA RQLSQSLLGK VIEGVWHTGI VVYGNEYFFG GGIQHLPVGR TPYGTPIRTI ELGLSHVPKD VFEMYLEEIS PRYTAESYNL
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA
Arabidopsis Description
PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFT9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.