Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra040360.1-P | Field mustard | cytosol | 95.16 | 97.52 |
CDY66750 | Canola | cytosol | 96.77 | 97.17 |
AT3G07090.1 | Thale cress | cytosol | 77.42 | 72.45 |
CDY65594 | Canola | cytosol, extracellular, plastid | 27.42 | 66.02 |
CDY05315 | Canola | mitochondrion | 83.87 | 64.4 |
CDX82731 | Canola | cytosol, extracellular, plastid | 15.32 | 63.33 |
GSMUA_Achr5P12910_001 | Banana | cytosol | 63.31 | 62.3 |
VIT_07s0005g06420.t01 | Wine grape | cytosol | 67.34 | 60.29 |
PGSC0003DMT400045523 | Potato | cytosol | 64.92 | 58.76 |
KRH46754 | Soybean | cytosol | 65.73 | 58.21 |
Solyc09g061310.2.1 | Tomato | cytosol | 64.52 | 57.97 |
KRG99787 | Soybean | cytosol | 64.92 | 57.71 |
CDY65492 | Canola | cytosol | 22.18 | 53.92 |
GSMUA_Achr4P26480_001 | Banana | cytosol, mitochondrion, plasma membrane | 58.47 | 46.62 |
Os10t0472400-01 | Rice | cytosol | 51.61 | 43.99 |
Zm00001d014043_P001 | Maize | mitochondrion | 52.82 | 40.68 |
KXG38351 | Sorghum | mitochondrion | 53.23 | 39.29 |
HORVU1Hr1G040180.1 | Barley | cytosol, nucleus | 35.48 | 31.77 |
TraesCS1B01G169200.1 | Wheat | mitochondrion | 49.19 | 29.33 |
TraesCS1D01G148600.1 | Wheat | mitochondrion | 48.39 | 28.24 |
TraesCS1A01G151600.1 | Wheat | mitochondrion | 47.58 | 27.83 |
HORVU1Hr1G040160.10 | Barley | cytosol, nucleus | 49.6 | 22.16 |
Protein Annotations
EnsemblPlants:CDY34915 | EnsemblPlantsGene:GSBRNA2T00057489001 | Gene3D:3.90.1720.30 | InterPro:PPPDE_dom | KEGG:00261+3.4.-.- | KEGG:00310+3.4.-.- |
KEGG:00550+3.4.-.- | KEGG:00780+3.4.-.- | PANTHER:PTHR12378 | PANTHER:PTHR12378:SF16 | PFAM:PF05903 | ProteinID:CDY34915 |
ProteinID:CDY34915.1 | SMART:SM01179 | UniParc:UPI0004EE41C8 | UniProt:A0A078H8V8 | MapMan:19.2.3.2.5 | MapMan:19.4.1.7 |
Description
BnaA01g32460DBnaA01g32460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8V8]
Coordinates
chrLK032343:+:93195..94220
Molecular Weight (calculated)
26949.3 Da
IEP (calculated)
6.247
GRAVY (calculated)
-0.267
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MCQEAHKVTL NVYDLSRGLA RQLSASLLGK VIEGVWHTGI VAYGNEYFFG GGIQHLPAGT TPYGAPLRTV EMGETHVPKD VFEMYLEEIS PRYTAESYNL
101: LTHNCNNFSN EVSQFLVGKG IPDYILQLPS EVMNSPMGGL LMPMIQNLEA TLRAGAVPNA PQFKPKSQPV GPNPSEKASE SPVVVQPSAS KEKVKEDPLG
201: DARTKIQEEI TREFASLMAQ GTQGIASEAA TIATKRVMQK YGHLNVSA
101: LTHNCNNFSN EVSQFLVGKG IPDYILQLPS EVMNSPMGGL LMPMIQNLEA TLRAGAVPNA PQFKPKSQPV GPNPSEKASE SPVVVQPSAS KEKVKEDPLG
201: DARTKIQEEI TREFASLMAQ GTQGIASEAA TIATKRVMQK YGHLNVSA
001: MAEEAHKVTL NVYDLSQGLA RQLSQSLLGK VIEGVWHTGI VVYGNEYFFG GGIQHLPVGR TPYGTPIRTI ELGLSHVPKD VFEMYLEEIS PRYTAESYNL
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA
Arabidopsis Description
PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFT9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.