Factsheet for TraesCS1D01G148600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G151600.1	Wheat	mitochondrion	83.29	83.49
TraesCS1B01G169200.1	Wheat	mitochondrion	80.47	82.21
Os10t0472400-01	Rice	cytosol	42.82	62.54
GSMUA_Achr5P12910_001	Banana	cytosol	35.06	59.13
HORVU1Hr1G040180.1	Barley	cytosol, nucleus	38.35	58.84
KXG38351	Sorghum	mitochondrion	43.53	55.06
HORVU1Hr1G040160.10	Barley	cytosol, nucleus	71.29	54.59
VIT_07s0005g06420.t01	Wine grape	cytosol	34.59	53.07
PGSC0003DMT400045523	Potato	cytosol	33.65	52.19
KRG99787	Soybean	cytosol	33.88	51.61
TraesCS6D01G369300.1	Wheat	cytosol	33.41	51.45
Solyc09g061310.2.1	Tomato	cytosol	33.18	51.09
AT3G07090.1	Thale cress	cytosol	31.53	50.57
Zm00001d014043_P001	Maize	mitochondrion	38.12	50.31
KRH46754	Soybean	cytosol	32.47	49.29
Bra040360.1-P	Field mustard	cytosol	27.76	48.76
CDY34915	Canola	cytosol	28.24	48.39
CDY66750	Canola	cytosol	28.0	48.18
Bra029621.1-P	Field mustard	cytosol	31.06	48.18
GSMUA_Achr4P26480_001	Banana	cytosol, mitochondrion, plasma membrane	35.06	47.91
CDY65594	Canola	cytosol, extracellular, plastid	9.88	40.78
CDX82731	Canola	cytosol, extracellular, plastid	5.65	40.0
CDY05315	Canola	mitochondrion	30.35	39.94
CDY65492	Canola	cytosol	8.94	37.25

Protein Annotations

EnsemblPlants:TraesCS1D01G148600.1	EnsemblPlantsGene:TraesCS1D01G148600	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	PANTHER:PTHR12378	PANTHER:PTHR12378:SF16
PFAM:PF05903	SEG:seg	SMART:SM01179	MapMan:19.2.3.2.5	MapMan:19.4.1.7	:

Description

No Description!

Coordinates

chr1D:+:204480814..204483790

Molecular Weight (calculated)

44849.0 Da

IEP (calculated)

5.283

GRAVY (calculated)

-0.368

Length

425 amino acids

Sequence
(BLAST)

001: MAKPRRSRFA VAGCGCFGGQ ARGKVAEDEY PVKLHIYDLS RGMARQLSTT VLGKPIDAIW HTGVVVHGKE YYFGGGIQQG RPGRTPYGTP ARVEHFGVTH
101: VSKEDFEGFL QEISPRYTPE TYNLLSNNCN HFSNEVVKFL VGSTVPSYIL DQPKEAMKSP IGALIMPMLQ GLETTMKAGA APQQPPQFVP APAAASQMQP
201: STNNIQMQSR SVTADEPGAD KTADHDSGII PAPKEAGEVQ PSAGSTQNEI ATDEMVSNDG GIIPPVVVLP TPKGVGQTQP STNNDQIESR SVTANETGAD
301: EMVDSDGGII PPPAEPAAPA AATQTEPSLN SIELQTVDEG TRMVTPPAVQ PAAPAATVAK VTLPAAAASD PLGEAKSRAQ EELKQEFAAI MATGTVQAGD
401: AAALAMRRVM ERHGLRRAAV PTQQR

Best Arabidopsis Sequence Match ( AT3G07090.1 )
(BLAST)

001: MAEEAHKVTL NVYDLSQGLA RQLSQSLLGK VIEGVWHTGI VVYGNEYFFG GGIQHLPVGR TPYGTPIRTI ELGLSHVPKD VFEMYLEEIS PRYTAESYNL
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFT9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.