Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G384300.1 | Wheat | cytosol | 90.94 | 89.64 |
| Zm00001d018461_P001 | Maize | cytosol | 75.36 | 78.79 |
| EES07741 | Sorghum | cytosol | 74.64 | 77.74 |
| Os02t0814000-01 | Rice | cytosol | 69.93 | 76.59 |
| TraesCS6B01G423700.1 | Wheat | plastid | 38.04 | 70.47 |
| TraesCS1D01G148600.1 | Wheat | mitochondrion | 51.45 | 33.41 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G369300.1 | EnsemblPlantsGene:TraesCS6D01G369300 | Gene3D:3.90.1720.30 | InterPro:PPPDE_dom | PANTHER:PTHR12378 | PANTHER:PTHR12378:SF16 |
| PFAM:PF05903 | SEG:seg | SMART:SM01179 | MapMan:19.2.3.2.5 | MapMan:19.4.1.7 | : |
Description
No Description!
Coordinates
chr6D:-:456092952..456094004
Molecular Weight (calculated)
29298.0 Da
IEP (calculated)
6.034
GRAVY (calculated)
-0.118
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEGHKVVL NVYDLSNGLA RQLSTSFLGK PIEAIWHTGV VVYGNEYFFG GGIQAAPAGA TQYGRPVRVV DLGVTHLPRE VFEDYLRDIA PRYTAATYSL
101: LTHNCNNFSN EVAQFLVGAG IPDYILNLPN EVMSSPMGAM IMPMIQNLEA TLRNNAAPQT TQFVPTPASV SVPQPVASAD KTPSSTAAAA ASAAPVGSSS
201: KKEEEKKIEK QTPEKAAAAA PAMADPLGSM RGKVQEEVMR EFAALMASGT LRASEAAALA MRRVMERHGD GASMQA
101: LTHNCNNFSN EVAQFLVGAG IPDYILNLPN EVMSSPMGAM IMPMIQNLEA TLRNNAAPQT TQFVPTPASV SVPQPVASAD KTPSSTAAAA ASAAPVGSSS
201: KKEEEKKIEK QTPEKAAAAA PAMADPLGSM RGKVQEEVMR EFAALMASGT LRASEAAALA MRRVMERHGD GASMQA
001: MAEEAHKVTL NVYDLSQGLA RQLSQSLLGK VIEGVWHTGI VVYGNEYFFG GGIQHLPVGR TPYGTPIRTI ELGLSHVPKD VFEMYLEEIS PRYTAESYNL
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA
Arabidopsis Description
PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFT9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.