Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G091230.1 | Barley | cytosol, mitochondrion, nucleus | 78.33 | 77.9 |
| TraesCS6B01G433100.1 | Wheat | nucleus | 79.44 | 77.3 |
| TraesCS5A01G099000.1 | Wheat | nucleus | 44.44 | 29.63 |
| TraesCS3A01G113300.1 | Wheat | nucleus | 45.0 | 19.24 |
| TraesCS3A01G471300.1 | Wheat | cytosol | 23.89 | 9.93 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G392900.1 | EnsemblPlantsGene:TraesCS6A01G392900 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PANTHER:PTHR45605 |
| PFAM:PF02365 | PFscan:PS51005 | SEG:seg | SUPFAM:SSF101941 | MapMan:15.5.17 | : |
Description
No Description!
Coordinates
chr6A:-:606997492..606998624
Molecular Weight (calculated)
19187.3 Da
IEP (calculated)
5.811
GRAVY (calculated)
-0.448
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MEASRFGFQM APAFKFDPTD ADLVAHYLLP RALGVPDPPF AHAVIDDDPA GLPPADLFAK HGHGGSQHAF FLHTADTDAP ESSKRAVKGG AGGRWRGQKA
101: SVESVTLVHP DGGELDMKYR RSELTYERDA GNGEGAGAAA DATGWVMHEY QIVSPPLQAT VLSRISKVRE DQQPAAAAQN
101: SVESVTLVHP DGGELDMKYR RSELTYERDA GNGEGAGAAA DATGWVMHEY QIVSPPLQAT VLSRISKVRE DQQPAAAAQN
001: MEENLPPGFR FHPTDEELIT HYLCRKVSDI GFTGKAVVDV DLNKCEPWDL PAKASMGEKE WYFFSQRDRK YPTGLRTNRA TEAGYWKTTG KDKEIYRSGV
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
Arabidopsis Description
anac058NAC domain containing protein 58 [Source:UniProtKB/TrEMBL;Acc:Q9LS50]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.