Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G392900.1 | Wheat | cytosol, mitochondrion, nucleus | 19.24 | 45.0 |
| HORVU6Hr1G073200.1 | Barley | cytosol | 30.64 | 40.69 |
| KXG27891 | Sorghum | cytosol | 21.14 | 38.2 |
| OQU82996 | Sorghum | cytosol | 20.67 | 36.1 |
| TraesCS5A01G099000.1 | Wheat | nucleus | 22.57 | 35.19 |
| TraesCS6B01G323700.1 | Wheat | mitochondrion, nucleus, vacuole | 30.88 | 34.21 |
| TraesCS6B01G323600.1 | Wheat | extracellular, mitochondrion, nucleus | 29.45 | 32.63 |
| TraesCS3A01G471300.1 | Wheat | cytosol | 16.63 | 16.17 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G113300.1 | EnsemblPlantsGene:TraesCS3A01G113300 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PANTHER:PTHR45605 |
| PFAM:PF02365 | PFscan:PS51005 | SEG:seg | SUPFAM:SSF101941 | MapMan:15.5.17 | : |
Description
No Description!
Coordinates
chr3A:-:80432134..80433399
Molecular Weight (calculated)
44574.2 Da
IEP (calculated)
4.689
GRAVY (calculated)
-0.522
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MEASKFGFGP DTPPAFKFDP TDADIVAGYL LPRALGLPNP YAHAIIEDDP ASAPPWELLR RHYGSGRVDH AFFFGPPANG RRKSRTIKGA GVWQGQKGSQ
101: GTVTLLRPGG GELDVTYKRY DLTFCRAKHG GSTGYVMHEY EIISPPLPGT VLSRVNINKH PKKKRAAAGE RPGTSYQYDA SAMPSDSSGF SFSDAQAGAL
201: CGGNGGGMPD AGCYYARLKY AFPEDCCLPA TDQPGASYNA AAMNSDGQGF AGAQVDAFSG GGMVDTDAAY NNYYGQYQEV APWSCQLGQS HNHGQYLSGD
301: AAVMRSHGEG FSVQQPAGAL SCYVENAALM CSGGEQQAGA LCGYNNTGSV MPTEGASSTI SLRDGGENGD KINDVLFGNH DGEFNREMSD QEIYDVLFGD
401: NYDGHVNCEQ SDAGDAATNP E
101: GTVTLLRPGG GELDVTYKRY DLTFCRAKHG GSTGYVMHEY EIISPPLPGT VLSRVNINKH PKKKRAAAGE RPGTSYQYDA SAMPSDSSGF SFSDAQAGAL
201: CGGNGGGMPD AGCYYARLKY AFPEDCCLPA TDQPGASYNA AAMNSDGQGF AGAQVDAFSG GGMVDTDAAY NNYYGQYQEV APWSCQLGQS HNHGQYLSGD
301: AAVMRSHGEG FSVQQPAGAL SCYVENAALM CSGGEQQAGA LCGYNNTGSV MPTEGASSTI SLRDGGENGD KINDVLFGNH DGEFNREMSD QEIYDVLFGD
401: NYDGHVNCEQ SDAGDAATNP E
001: MAPVSLPPGF RFHPTDEELI TYYLKRKING LEIELEVIAE VDLYKCEPWD LPGKSLLPSK DQEWYFFSPR DRKYPNGSRT NRATKGGYWK ATGKDRRVSW
101: RDRAIGTKKT LVYYRGRAPH GIRTGWVMHE YRLDETECEP SAYGMQDAYA LCRVFKKIVI EAKPRDQHRS YVHAMSNVSG NCSSSFDTCS DLEISSTTHQ
201: VQNTFQPRFG NERFNSNAIS NEDWSQYYGS SYRPFPTPYK VNTEIECSML QHNIYLPPLR VENSAFSDSD FFTSMTHNND HGVFDDFTFA ASNSNHNNSV
301: GDQVIHVGNY DEQLITSNRH MNQTGYIKEQ KIRSSLDNTD EDPGFHGNNT NDNIDIDDFL SFDIYNEDNV NQIEDNEDVN TNETLDSSGF EVVEEETRFN
401: NQMLISTYQT TKILYHQVVP CHTLKVHVNP ISHNVEERTL FIEEDKDSWL QRAEKITKTK LTLFSLMAQQ YYKCLAIFF
101: RDRAIGTKKT LVYYRGRAPH GIRTGWVMHE YRLDETECEP SAYGMQDAYA LCRVFKKIVI EAKPRDQHRS YVHAMSNVSG NCSSSFDTCS DLEISSTTHQ
201: VQNTFQPRFG NERFNSNAIS NEDWSQYYGS SYRPFPTPYK VNTEIECSML QHNIYLPPLR VENSAFSDSD FFTSMTHNND HGVFDDFTFA ASNSNHNNSV
301: GDQVIHVGNY DEQLITSNRH MNQTGYIKEQ KIRSSLDNTD EDPGFHGNNT NDNIDIDDFL SFDIYNEDNV NQIEDNEDVN TNETLDSSGF EVVEEETRFN
401: NQMLISTYQT TKILYHQVVP CHTLKVHVNP ISHNVEERTL FIEEDKDSWL QRAEKITKTK LTLFSLMAQQ YYKCLAIFF
Arabidopsis Description
NAC045NAC045 [Source:UniProtKB/TrEMBL;Acc:A0A178VIZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.