CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82996	Sorghum	cytosol	38.63	37.34
TraesCS5D01G111300.1	Wheat	nucleus	36.91	32.45
HORVU6Hr1G073200.1	Barley	cytosol	40.77	29.97
TraesCS6B01G323700.1	Wheat	mitochondrion, nucleus, vacuole	38.2	23.42
OQU76088	Sorghum	cytosol, extracellular, nucleus	16.74	22.94
TraesCS6B01G323600.1	Wheat	extracellular, mitochondrion, nucleus	36.48	22.37
TraesCS3A01G113300.1	Wheat	nucleus	38.2	21.14
OQU76087	Sorghum	nucleus, plasma membrane	19.74	15.86
OQU89927	Sorghum	nucleus	21.03	14.98
OQU86599	Sorghum	nucleus	21.89	14.37
EES01531	Sorghum	nucleus	14.59	11.97

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	UniProt:A0A1B6PQE4	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	EnsemblPlants:KXG27891	ProteinID:KXG27891	ProteinID:KXG27891.1	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR45605	EnsemblPlantsGene:SORBI_3005G060000	SUPFAM:SSF101941
UniParc:UPI00081AD5DB	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:6176188..6176886

Molecular Weight (calculated)

24909.0 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.632

Length

233 amino acids

Sequence
(BLAST)

001: MEAWRFGFDP SLFPPAYKFD PTDTDIVVHY LLPRALGVPN PYEHAVIDGD PCSCPPWELM RRNGHADSDH AFFFPPPRDG EKRPVRVVSS PAPAPGEDDG
101: ARARGKWDAQ KSTESSVVLV RGGGPGGIGG GAEVLVKYKR CNLSYYHGKE PSTSGWVMHE YQITVPPRLS GTVLSRVKVT DRGKQRLRKA AAGGGSQQVV
201: AVPDPDEPGP SNYDDGGGGD GNALGSSGGE RAE

Best Arabidopsis Sequence Match ( AT1G61110.1 )
(BLAST)

001: MENMGDSSIG PGHPHLPPGF RFHPTDEELV VHYLKKKADS VPLPVSIIAE IDLYKFDPWE LPSKASFGEH EWYFFSPRDR KYPNGVRPNR AATSGYWKAT
101: GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLSTA AKPPDLTTTR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS
201: KSSANSSSTS VLDNNDNNNN NNEEHFFDGM VVSSDKRSLC GQYRMGHEAS GSSSFGSFLS SKRFHHTGDL NNDNYNVSFV SMLSEIPQSS GFHANGVMDT
301: TSSLADHGVL RQAFQLPNMN WHS

Arabidopsis Description

NAC025NAC transcription factor 25 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY42]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.