CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU86599	Sorghum	nucleus	44.65	41.13
OQU76088	Sorghum	cytosol, extracellular, nucleus	14.68	28.24
KXG27891	Sorghum	cytosol	14.98	21.03
OQU82996	Sorghum	cytosol	14.98	20.33
OQU76087	Sorghum	nucleus, plasma membrane	17.13	19.31
EES01531	Sorghum	nucleus	15.9	18.31
TraesCS3D01G467000.1	Wheat	cytosol, nucleus, plastid	23.85	18.14
TraesCS3A01G471300.1	Wheat	cytosol	21.71	16.4
Os02t0285900-00	Rice	nucleus	24.77	16.1

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	UniProt:A0A1W0W6A5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	EnsemblPlants:OQU89927	ProteinID:OQU89927
ProteinID:OQU89927.1	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR45605	EnsemblPlantsGene:SORBI_3002G295400	SUPFAM:SSF101941
UniParc:UPI0009DC8F99	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:67271871..67273253

Molecular Weight (calculated)

35285.7 Da

IEP (calculated)

4.372

GRAVY (calculated)

-0.636

Length

327 amino acids

Sequence
(BLAST)

001: MSAADALGLP PGVRFDPTPE ELVEFYLMPR ALGQPTAVPG IIIEDAEATT SSRHPWKLLT RNRRTEDDEA YFFERVASGD DARGGAARQD RSCGGGRWTW
101: VGQKRFPDQV LPLPLPLRGE AEQVSWGKYS LNLQEGRRRK GGSTGWVMHE YTIAPPRCPP CPVKLCHVAF TGHGQKRQRV PDDDGEGEEL EAGTGMPQHK
201: RVATGTGSTP SSSVITTATP DHGGLGAAHL QNQEEPFPNY YETSSSCPPI QPVSDDGAYH EELPMDQVSC TTEQSSGDMD DLPEFFEGWG DLDTFTDTSG
301: VQDSDYGMAA GILADGGPGD GTFAVTA

Best Arabidopsis Sequence Match ( AT3G10490.1 )
(BLAST)

001: MGRESVAVVT APPSATAPGT ASVATSLAPG FRFHPTDEEL VSYYLKRKVL GQPVRFDAIG EVDIYKHEPW DLAVFSRLKT RDQEWYFYSA LDKKYGNGAR
101: MNRATNRGYW KATGKDREIR RDILLLGMKK TLVFHSGRAP DGLRTNWVMH EYRLVEYETE KNGNLVQDAY VLCRVFHKNN IGPPSGNRYA PFMEEEWADD
201: EGALIPGIDV KLRLEPPPVA NGNDQMDQII YASSGVHL

Arabidopsis Description

ANAC052NAC052 [Source:UniProtKB/TrEMBL;Acc:A0A178VCW1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.