Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU89927 | Sorghum | nucleus | 16.1 | 24.77 |
| OQU86599 | Sorghum | nucleus | 16.7 | 23.66 |
| TraesCS3D01G467000.1 | Wheat | cytosol, nucleus, plastid | 17.3 | 20.23 |
| TraesCS3A01G471300.1 | Wheat | cytosol | 17.3 | 20.09 |
| Os07t0272700-00 | Rice | nucleus | 12.52 | 10.41 |
| Os07t0456900-01 | Rice | nucleus | 14.51 | 9.41 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | ProteinID:BAD21497.1 | ProteinID:BAH91630.1 | ProteinID:BAS78150.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| EnsemblPlantsGene:Os02g0285900 | EnsemblPlants:Os02t0285900-00 | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR45605 | UniProt:Q6KA60 |
| SUPFAM:SSF101941 | UniParc:UPI0000377BFD | SEG:seg | : | : | : |
Description
NAC DOMAIN-CONTAINING PROTEIN 44No apical meristem (NAM) protein domain containing protein. (Os02t0285900-00)
Coordinates
chr2:-:10747495..10749006
Molecular Weight (calculated)
56829.6 Da
IEP (calculated)
3.830
GRAVY (calculated)
-0.750
Length
503 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAARSQGL SPGFKFNPSD QMLVELFLLP YLIDGELPVR GLVFVEDDHL GGLPLPPWIL LDRHGRGDED EAYFVAPMGA GDGARQVRSV AGGGKWVKQR
101: SEGKGEVVVA PGGEAFLWEN FSLNFHRDDR RSGSTGWVMH EYIVSPPAGS AVAASHRATH IAFTGHGQNR KRVPDGYVLV LDDAVPPAAA AAAPPPESEQ
201: SNQEEQEYAA YTDQIQQQCF VPEQQMSNQE YFPEAAAEQS NQQFFVPAEE QSSHQLFLPA EEQSNQQFFM PAEEQSSHQF LPAEEQSSHQ FLPAEEQSNY
301: QQFLPALEQM TQSNQEFAYG EQSQCYIVPE QQQLSNQEYA YSEQSQCYIL PEQQQLSDQE YAYSEQSQCY ILPEQQELSN QEAEYAFVCY DEQQQQQQQS
401: NQEAEYAFAC YDEQQQQQQQ QYLHGDLTSW QEPFVTSSSS SSQQFLGQEQ LLPDGLLLDG FGEISQQQGD QEYAYCEESQ CYIMPEQQQQ SNQEAEFAFA
501: CYD
101: SEGKGEVVVA PGGEAFLWEN FSLNFHRDDR RSGSTGWVMH EYIVSPPAGS AVAASHRATH IAFTGHGQNR KRVPDGYVLV LDDAVPPAAA AAAPPPESEQ
201: SNQEEQEYAA YTDQIQQQCF VPEQQMSNQE YFPEAAAEQS NQQFFVPAEE QSSHQLFLPA EEQSNQQFFM PAEEQSSHQF LPAEEQSSHQ FLPAEEQSNY
301: QQFLPALEQM TQSNQEFAYG EQSQCYIVPE QQQLSNQEYA YSEQSQCYIL PEQQQLSDQE YAYSEQSQCY ILPEQQELSN QEAEYAFVCY DEQQQQQQQS
401: NQEAEYAFAC YDEQQQQQQQ QYLHGDLTSW QEPFVTSSSS SSQQFLGQEQ LLPDGLLLDG FGEISQQQGD QEYAYCEESQ CYIMPEQQQQ SNQEAEFAFA
501: CYD
001: MISKDPRSSL PPGFRFHPTD EELILHYLRK KVSSSPVPLS IIADVDIYKS DPWDLPAKAP FGEKEWYFFS PRDRKYPNGA RPNRAAASGY WKATGTDKLI
101: AVPNGEGFHE NIGIKKALVF YRGKPPKGVK TNWIMHEYRL ADSLSPKRIN SSRSGGSEVN NNFGDRNSKE YSMRLDDWVL CRIYKKSHAS LSSPDVALVT
201: SNQEHEENDN EPFVDRGTFL PNLQNDQPLK RQKSSCSFSN LLDATDLTFL ANFLNETPEN RSESDFSFMI GNFSNPDIYG NHYLDQKLPQ LSSPTSETSG
301: IGSKRERVDF AEETINASKK MMNTYSYNNS IDQMDHSMMQ QPSFLNQELM MSSHLQYQG
101: AVPNGEGFHE NIGIKKALVF YRGKPPKGVK TNWIMHEYRL ADSLSPKRIN SSRSGGSEVN NNFGDRNSKE YSMRLDDWVL CRIYKKSHAS LSSPDVALVT
201: SNQEHEENDN EPFVDRGTFL PNLQNDQPLK RQKSSCSFSN LLDATDLTFL ANFLNETPEN RSESDFSFMI GNFSNPDIYG NHYLDQKLPQ LSSPTSETSG
301: IGSKRERVDF AEETINASKK MMNTYSYNNS IDQMDHSMMQ QPSFLNQELM MSSHLQYQG
Arabidopsis Description
NAC047NAC transcription factor 47 [Source:UniProtKB/Swiss-Prot;Acc:Q84TD6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.