CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU89927	Sorghum	nucleus	41.13	44.65
OQU76088	Sorghum	cytosol, extracellular, nucleus	13.52	28.24
KXG27891	Sorghum	cytosol	14.37	21.89
OQU82996	Sorghum	cytosol	14.37	21.16
OQU76087	Sorghum	nucleus, plasma membrane	15.77	19.31
TraesCS3D01G467000.1	Wheat	cytosol, nucleus, plastid	23.38	19.3
EES01531	Sorghum	nucleus	15.21	19.01
TraesCS3A01G471300.1	Wheat	cytosol	22.82	18.71
Os02t0285900-00	Rice	nucleus	23.66	16.7

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	UniProt:A0A1W0VWU0	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	EnsemblPlants:OQU86599	ProteinID:OQU86599
ProteinID:OQU86599.1	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR45605	EnsemblPlantsGene:SORBI_3003G110932	SUPFAM:SSF101941
UniParc:UPI0009DC887B	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:10002111..10003514

Molecular Weight (calculated)

38509.2 Da

IEP (calculated)

4.723

GRAVY (calculated)

-0.680

Length

355 amino acids

Sequence
(BLAST)

001: MSAAEALGLP PGVRFDPTGD ELVEYYLLPR ALGRPPAVPG IIIDDDTATA TTSAQHPWKL LTRHRRTDDS EAYFFERVAG STDGAKAKGG GAGARQDRSC
101: GGGRWTWVGQ KRAPDEALPL RGDSDGERVS WGKYSLNLQE GRRRKGGSTG WVMHEYTVAA SPQCPLLPVK LCHVSFTGHG QKRQRVPDDD GEGQDQSQAY
201: HQEQFMGFMN PAGSSTETHC AMQPASDLGS SQQPQASHPL NEEHQFSVAQ LLGGISSPLC PPTTPAAYHE QQNIQSFPLA DLPLSTDQES CTTEQSHGNM
301: NQYDDFFRGW GDFNSFCDTS GIQDDDDMAA QTLAAVGCGG GSSWDPHFFY EQPAL

Best Arabidopsis Sequence Match ( AT3G10480.2 )
(BLAST)

001: MGRESLAVVS SPPSATAPST AVSATSLAPG FRFHPTDEEL VSYYLKRKVL GKPVRFDAIG EVDIYKHEPW DLAVFSKLKT RDQEWYFFSA LDKKYGNGAR
101: MNRATNKGYW KATGKDREIR RDIQLLGMKK TLVFHSGRAP DGLRTNWVMH EYRLVEYETE TNGSLLDAYV LCRVFHKNNI GPPSGNRYAP FMEEEWADGG
201: GALIPGIDVR VRVEALPQAN GNNQMDQEMH SASKDLININ ELPRDATPMD IEPNQQNHHE SAFKPQESNN HSGYEEDEDT LKREHAEEDE RPPSLCILNK
301: EAPLPLLQYK RRRQNESNNN SSRNTQDHCS STITTVDNTT TLISSSAAAA TNTAISALLE FSLMGISDKK ENQQKEETSP PSPIASPEEK VNDLQKEVHQ
401: MSVERETFKL EMMSAEAMIS ILQSRIDALR QENEELKKKN ASGQAS

Arabidopsis Description

ANAC050NAC domain containing protein 50 [Source:UniProtKB/TrEMBL;Acc:F4J3S6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.