CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU76088	Sorghum	cytosol, extracellular, nucleus	32.39	54.12
OQU76087	Sorghum	nucleus, plasma membrane	33.1	32.41
TraesCS2D01G083700.1	Wheat	nucleus	35.56	30.7
TraesCS2B01G100600.1	Wheat	nucleus	34.51	28.24
OQU89927	Sorghum	nucleus	18.31	15.9
Os07t0272700-00	Rice	nucleus	33.1	15.54
OQU82996	Sorghum	cytosol	13.03	15.35
OQU86599	Sorghum	nucleus	19.01	15.21
KXG27891	Sorghum	cytosol	11.97	14.59
Os07t0456900-01	Rice	nucleus	33.45	12.24

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:8079264	UniProt:C5XKZ8	EnsemblPlants:EES01531	ProteinID:EES01531
ProteinID:EES01531.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093
InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR45605	EnsemblPlantsGene:SORBI_3003G310000
SUPFAM:SSF101941	UniParc:UPI0001A84330	RefSeq:XP_002456411.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:63827152..63828399

Molecular Weight (calculated)

31540.5 Da

IEP (calculated)

4.472

GRAVY (calculated)

-0.666

Length

284 amino acids

Sequence
(BLAST)

001: MATEHGFPPG YRFVPTDEEV VEFCLLPRIQ DQPLLPNDII EDDPLSAPPW ALLEKHGRRH QAFFFAACQA MNAKGNRQKR TCAGQGTWQG QGKGKRKRQQ
101: EEGEEEVKKK LRVPVRGSAE TMEIEWDKYA LNFHEHGVKG STGWVMHEYS ITAPPELARS PVRVYCIRFS GHGRNAKKNS RDAQHRGDDE FEDEEGGQVD
201: DDADAAGAMA TATWSAAEED AALLVQEYLT AFPVAAVDVV SANPADAADA GAGYDQDLPE LVDDDSFDFM NTLPDLVPRF DFSQ

Best Arabidopsis Sequence Match ( AT5G17260.1 )
(BLAST)

001: MAPVSLPPGF RFHPTDEELI TYYLKRKING QEIELEIIPE VDLYKCEPWD LPGKSLIPSK DQEWFFFSPR DRKYPNGSRT NRATKGGYWK ATGKDRRVSW
101: RDRAIGTKKT LVYYRGRAPH GIRTGWVMHE YRLDESECEP SAFGMQDAYA LCRVFKKIVI EAKPRDQHQQ QHQPYVHTSS NISGSSSFDV CSDLEISSNT
201: PYNTAAHIQP RFGNANAISD HDDWSQYLSQ NMPTSFSDYG SPYGPYLTQS KVNTEVQCEM FQHQMSLPPL RVENSQAQTS DFSKRLHQNS GQSGFDDFTF
301: AASNSNQFYN SNVDDHLIHI GNLDEQSYIE EQELILPSFQ SNDQDLELYG GSRTNTIDNI EIDDFFSFEN QAQDNDNSNV TPNSAGFEMI GEEIIVNHKM
401: LISTRQTTEI LYYQVVPSQI LKIHINPVHG NEERTMLMEE DSDDSWFQKA ENVAKMKLKQ ISLVAKRYYK CLTIIF

Arabidopsis Description

NAC086NAC domain-containing protein 86 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFI5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.