Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G100600.1 | Wheat | nucleus | 80.55 | 76.37 |
| OQU76088 | Sorghum | cytosol, extracellular, nucleus | 26.14 | 50.59 |
| EES01531 | Sorghum | nucleus | 30.7 | 35.56 |
| OQU76087 | Sorghum | nucleus, plasma membrane | 30.7 | 34.83 |
| Os07t0272700-00 | Rice | nucleus | 33.74 | 18.35 |
| TraesCS5D01G111300.1 | Wheat | nucleus | 13.37 | 16.6 |
| TraesCS3D01G467000.1 | Wheat | cytosol, nucleus, plastid | 19.76 | 15.12 |
| Os07t0456900-01 | Rice | nucleus | 32.22 | 13.66 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G083700.1 | EnsemblPlantsGene:TraesCS2D01G083700 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PANTHER:PTHR45605 |
| PFAM:PF02365 | PFscan:PS51005 | SEG:seg | SUPFAM:SSF101941 | MapMan:15.5.17 | : |
Description
No Description!
Coordinates
chr2D:+:36201731..36202720
Molecular Weight (calculated)
36172.8 Da
IEP (calculated)
4.243
GRAVY (calculated)
-0.557
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MVNPADVLGL TRGYKLEPLD EEAVEYYLLR RLLGQELPLE GIILEDDPLS APPWELLNKH EREDDAFFFA YGQTIDSKES RNKRTCAGGG CWEGQKVVVD
101: DKELIVPDSG MEITWKKYQL NFHKDGEKGS TGWVMHEYSV TAPPDLASSS LRLYRILFSG HGKKRKREPD DYGHDDSGER AATRQAIAEE SDQIPASHSV
201: SPQYQDCYGN AANATEDHHL LGSSQDLGVG PAASTSDQEI QDAQAGVLYE FAGADGGVAP VAGTLPSSSA MDESFLDIEL PENINFDEFF AFDEVCGLEG
301: HLDGQFSGAG MHTQLPGMQP RPNPYYMSC
101: DKELIVPDSG MEITWKKYQL NFHKDGEKGS TGWVMHEYSV TAPPDLASSS LRLYRILFSG HGKKRKREPD DYGHDDSGER AATRQAIAEE SDQIPASHSV
201: SPQYQDCYGN AANATEDHHL LGSSQDLGVG PAASTSDQEI QDAQAGVLYE FAGADGGVAP VAGTLPSSSA MDESFLDIEL PENINFDEFF AFDEVCGLEG
301: HLDGQFSGAG MHTQLPGMQP RPNPYYMSC
001: MAPVSLPPGF RFHPTDEELI TYYLKRKING QEIELEIIPE VDLYKCEPWD LPGKSLIPSK DQEWFFFSPR DRKYPNGSRT NRATKGGYWK ATGKDRRVSW
101: RDRAIGTKKT LVYYRGRAPH GIRTGWVMHE YRLDESECEP SAFGMQDAYA LCRVFKKIVI EAKPRDQHQQ QHQPYVHTSS NISGSSSFDV CSDLEISSNT
201: PYNTAAHIQP RFGNANAISD HDDWSQYLSQ NMPTSFSDYG SPYGPYLTQS KVNTEVQCEM FQHQMSLPPL RVENSQAQTS DFSKRLHQNS GQSGFDDFTF
301: AASNSNQFYN SNVDDHLIHI GNLDEQSYIE EQELILPSFQ SNDQDLELYG GSRTNTIDNI EIDDFFSFEN QAQDNDNSNV TPNSAGFEMI GEEIIVNHKM
401: LISTRQTTEI LYYQVVPSQI LKIHINPVHG NEERTMLMEE DSDDSWFQKA ENVAKMKLKQ ISLVAKRYYK CLTIIF
101: RDRAIGTKKT LVYYRGRAPH GIRTGWVMHE YRLDESECEP SAFGMQDAYA LCRVFKKIVI EAKPRDQHQQ QHQPYVHTSS NISGSSSFDV CSDLEISSNT
201: PYNTAAHIQP RFGNANAISD HDDWSQYLSQ NMPTSFSDYG SPYGPYLTQS KVNTEVQCEM FQHQMSLPPL RVENSQAQTS DFSKRLHQNS GQSGFDDFTF
301: AASNSNQFYN SNVDDHLIHI GNLDEQSYIE EQELILPSFQ SNDQDLELYG GSRTNTIDNI EIDDFFSFEN QAQDNDNSNV TPNSAGFEMI GEEIIVNHKM
401: LISTRQTTEI LYYQVVPSQI LKIHINPVHG NEERTMLMEE DSDDSWFQKA ENVAKMKLKQ ISLVAKRYYK CLTIIF
Arabidopsis Description
NAC086NAC domain-containing protein 86 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFI5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.