Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G083700.1 | Wheat | nucleus | 76.37 | 80.55 |
| OQU76088 | Sorghum | cytosol, extracellular, nucleus | 24.78 | 50.59 |
| OQU76087 | Sorghum | nucleus, plasma membrane | 29.39 | 35.17 |
| EES01531 | Sorghum | nucleus | 28.24 | 34.51 |
| Os07t0272700-00 | Rice | nucleus | 32.56 | 18.68 |
| TraesCS5B01G104200.1 | Wheat | nucleus | 13.83 | 18.39 |
| TraesCS6B01G433100.1 | Wheat | nucleus | 8.93 | 16.76 |
| Os07t0456900-01 | Rice | nucleus | 31.41 | 14.05 |
| TraesCS6B01G323700.1 | Wheat | mitochondrion, nucleus, vacuole | 15.27 | 13.95 |
| TraesCS6B01G323600.1 | Wheat | extracellular, mitochondrion, nucleus | 14.7 | 13.42 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G100600.1 | EnsemblPlantsGene:TraesCS2B01G100600 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PANTHER:PTHR45605 |
| PFAM:PF02365 | PFscan:PS51005 | SEG:seg | SUPFAM:SSF101941 | MapMan:15.5.17 | : |
Description
No Description!
Coordinates
chr2B:-:61269802..61270845
Molecular Weight (calculated)
38028.8 Da
IEP (calculated)
4.417
GRAVY (calculated)
-0.595
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKPADVLGL TRGYKLEPHD DEAVEYYLLR RLLGQELPLE GIILEDDPLS APPWELLNKH ELEDNAFFFA HGQTIDSKGS RNKRTCAGGG CWEGQKVLVD
101: DKELIVPDSG MEITWKKYQL NFHNDGEKGS TGWVMHEYSV TAPPDLASSS LRLYRILFSG HGKKRKREPD DYGRDHDGGA RAATRQPIDE ESELHLLEER
201: ISASADFGRS SEDQDGYGNA GNATEDHHLL GSSHDLGRSW FLPGGDHGVG PAAATSGQDA PAAGVIHEFA GADDGVATVE GTLPSSGAMD ESFLDIELPE
301: NINFDEFFAF DEVCGLEGHL DGQFSGTSMH TQFSGMQPRP NPYYMSC
101: DKELIVPDSG MEITWKKYQL NFHNDGEKGS TGWVMHEYSV TAPPDLASSS LRLYRILFSG HGKKRKREPD DYGRDHDGGA RAATRQPIDE ESELHLLEER
201: ISASADFGRS SEDQDGYGNA GNATEDHHLL GSSHDLGRSW FLPGGDHGVG PAAATSGQDA PAAGVIHEFA GADDGVATVE GTLPSSGAMD ESFLDIELPE
301: NINFDEFFAF DEVCGLEGHL DGQFSGTSMH TQFSGMQPRP NPYYMSC
001: MDNVKLVKNG VLRLPPGFRF HPTDEELVVQ YLKRKVCSSP LPASIIPEFD VCRADPWDLP GNLEKERYFF STREAKYPNG NRSNRATGSG YWKATGIDKR
101: VVTSRGNQIV GLKKTLVFYK GKPPHGSRTD WIMHEYRLSS SPPSSMGPTQ NWVLCRIFLK KRAGNKNDDD DGDSRNLRHN NNNNSSDQIE IITTDQTDDK
201: TKPIFFDFMR KERTTDLNLL PSSPSSDHAS SGVTTEIFSS SDEETSSCNS FR
101: VVTSRGNQIV GLKKTLVFYK GKPPHGSRTD WIMHEYRLSS SPPSSMGPTQ NWVLCRIFLK KRAGNKNDDD DGDSRNLRHN NNNNSSDQIE IITTDQTDDK
201: TKPIFFDFMR KERTTDLNLL PSSPSSDHAS SGVTTEIFSS SDEETSSCNS FR
Arabidopsis Description
NAC083NAC domain-containing protein 83 [Source:UniProtKB/Swiss-Prot;Acc:Q9FY93]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.