Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, extracellular, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G323700.1 | Wheat | mitochondrion, nucleus, vacuole | 80.26 | 80.26 |
| HORVU6Hr1G073200.1 | Barley | cytosol | 41.05 | 49.21 |
| TraesCS6B01G433100.1 | Wheat | nucleus | 21.84 | 44.86 |
| KXG27891 | Sorghum | cytosol | 22.37 | 36.48 |
| TraesCS5B01G104200.1 | Wheat | nucleus | 23.95 | 34.87 |
| OQU82996 | Sorghum | cytosol | 21.58 | 34.02 |
| TraesCS3A01G113300.1 | Wheat | nucleus | 32.63 | 29.45 |
| TraesCS2B01G100600.1 | Wheat | nucleus | 13.42 | 14.7 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G323600.1 | EnsemblPlantsGene:TraesCS6B01G323600 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PANTHER:PTHR45605 |
| PFAM:PF02365 | PFscan:PS51005 | SEG:seg | SUPFAM:SSF101941 | MapMan:15.5.17 | : |
Description
No Description!
Coordinates
chr6B:+:572493671..572495161
Molecular Weight (calculated)
40517.1 Da
IEP (calculated)
4.569
GRAVY (calculated)
-0.483
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAYKFGFGL GMPPAFKFDP TDGDIVAYYL LPRALGLPNP HAHAIIEEDP GSAPPWELLR RHGGDAGIEH AFFFGPPTDG GRRRRTVKGG GVWQGQKLNE
101: GTVTMLGPGG AELDIAYKRY DLTFKLKAGR GSVSTGYVMH EYEITSPPLP GKVLTRVNIS SNAKKEKAPG AATAGADQQV MVPDPELPGT SYYDHDAAAM
201: ASNGEGLGDS QAGTLYGGNG GDTADADSCY TPLNCVLPDG EYIDYGLSYT NQLAEAMKSD SQGFTGAQAD AFYGCGMVET NGAYYDPSPF VPVASQEVAP
301: FLNQLGQIHS YNQYYAGDAA VMFSGGEQQA GGALCGYNDD GGVMKTESAR STILPCNGGE ENRDEIYGYE ASRRQRRRLQ
101: GTVTMLGPGG AELDIAYKRY DLTFKLKAGR GSVSTGYVMH EYEITSPPLP GKVLTRVNIS SNAKKEKAPG AATAGADQQV MVPDPELPGT SYYDHDAAAM
201: ASNGEGLGDS QAGTLYGGNG GDTADADSCY TPLNCVLPDG EYIDYGLSYT NQLAEAMKSD SQGFTGAQAD AFYGCGMVET NGAYYDPSPF VPVASQEVAP
301: FLNQLGQIHS YNQYYAGDAA VMFSGGEQQA GGALCGYNDD GGVMKTESAR STILPCNGGE ENRDEIYGYE ASRRQRRRLQ
001: MEKRSSIKNR GVLRLPPGFR FHPTDEELVV QYLRRKVTGL PLPASVIPET DVCKSDPWDL PGDCESEMYF FSTREAKYPN GNRSNRSTGS GYWKATGLDK
101: QIGKKKLVVG MKKTLVFYKG KPPNGTRTNW VLHEYRLVDS QQDSLYNMNW VLCRVFLKKR SNSNSKRKED EKEEVENEKE TETEREREEE NKKSTCPIFY
201: DFMRKDTKKK RRRRRCCDLN LTPATCCCCS SSTSSSSVCS SALTHTSSND NRQEISYREN KFCLFL
101: QIGKKKLVVG MKKTLVFYKG KPPNGTRTNW VLHEYRLVDS QQDSLYNMNW VLCRVFLKKR SNSNSKRKED EKEEVENEKE TETEREREEE NKKSTCPIFY
201: DFMRKDTKKK RRRRRCCDLN LTPATCCCCS SSTSSSSVCS SALTHTSSND NRQEISYREN KFCLFL
Arabidopsis Description
NAC041NAC domain-containing protein 41 [Source:UniProtKB/Swiss-Prot;Acc:O22798]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.