Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G091230.1 | Barley | cytosol, mitochondrion, nucleus | 27.76 | 48.62 |
| TraesCS6B01G323700.1 | Wheat | mitochondrion, nucleus, vacuole | 49.53 | 41.32 |
| TraesCS6B01G323600.1 | Wheat | extracellular, mitochondrion, nucleus | 49.21 | 41.05 |
| KXG27891 | Sorghum | cytosol | 29.97 | 40.77 |
| OQU82996 | Sorghum | cytosol | 24.29 | 31.95 |
| TraesCS3A01G113300.1 | Wheat | nucleus | 40.69 | 30.64 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A287UNM5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU6Hr1G073200 | EnsemblPlants:HORVU6Hr1G073200.1 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR45605 | SUPFAM:SSF101941 | UniParc:UPI000B467929 | SEG:seg |
Description
No Description!
Coordinates
chrchr6H:-:507570941..507571891
Molecular Weight (calculated)
33648.3 Da
IEP (calculated)
4.565
GRAVY (calculated)
-0.371
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MEASKFGFGP NLPPAFKFDP TDDDIVAYYL LPRALGLPNP HAHAIIEDDP GSAPPWELLR RHGGDGGIDH ALFYGPPTAG RRRKRTVKGG GVWQGQKVNE
101: GIATLLGPGG AELDIAYKRY DLTFKRKVSM GYVMHEYEIT SPPLPGKVLS RVKISSNAKG KAAAAADQQI VLPDPELPGT SYYDHAAAAD QQVVLPDPEL
201: LGTSYNDHDA AAMESNGEGL GDTQAGALSG GNGGDYCYEP LNCILPEGEY MDNGLSFTDQ LAAAMNSDGQ GFTAAQAGAF YGCGMVETNG AYYGPSPFFP
301: VASQEVAPWP NQLGQIH
101: GIATLLGPGG AELDIAYKRY DLTFKRKVSM GYVMHEYEIT SPPLPGKVLS RVKISSNAKG KAAAAADQQI VLPDPELPGT SYYDHAAAAD QQVVLPDPEL
201: LGTSYNDHDA AAMESNGEGL GDTQAGALSG GNGGDYCYEP LNCILPEGEY MDNGLSFTDQ LAAAMNSDGQ GFTAAQAGAF YGCGMVETNG AYYGPSPFFP
301: VASQEVAPWP NQLGQIH
001: MEKRSSIKNR GVLRLPPGFR FHPTDEELVV QYLRRKVTGL PLPASVIPET DVCKSDPWDL PGDCESEMYF FSTREAKYPN GNRSNRSTGS GYWKATGLDK
101: QIGKKKLVVG MKKTLVFYKG KPPNGTRTNW VLHEYRLVDS QQDSLYGQNM NWVLCRVFLK KRSNSNSKRK EDEKEEVENE KETETERERE EENKKSTCPI
201: FYDFMRKDTK KKRRRRRCCD LNLTPATCCC CSSSTSSSSV CSSALTHTSS NDNRQEISYR ENKFCLFL
101: QIGKKKLVVG MKKTLVFYKG KPPNGTRTNW VLHEYRLVDS QQDSLYGQNM NWVLCRVFLK KRSNSNSKRK EDEKEEVENE KETETERERE EENKKSTCPI
201: FYDFMRKDTK KKRRRRRCCD LNLTPATCCC CSSSTSSSSV CSSALTHTSS NDNRQEISYR ENKFCLFL
Arabidopsis Description
NAC041NAC domain-containing protein 41 [Source:UniProtKB/Swiss-Prot;Acc:O22798]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.