CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus

Predictor Summary:

nucleus 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	nucleus
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU76088	Sorghum	cytosol, extracellular, nucleus	35.52	60.59
EES01531	Sorghum	nucleus	32.41	33.1
TraesCS2D01G083700.1	Wheat	nucleus	34.83	30.7
TraesCS2B01G100600.1	Wheat	nucleus	35.17	29.39
KXG27891	Sorghum	cytosol	15.86	19.74
OQU89927	Sorghum	nucleus	19.31	17.13
OQU82996	Sorghum	cytosol	14.14	17.01
Os07t0272700-00	Rice	nucleus	34.83	16.69
OQU86599	Sorghum	nucleus	19.31	15.77
Os07t0456900-01	Rice	nucleus	34.14	12.76

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	UniProt:A0A1W0VS35	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	EnsemblPlants:OQU76087	ProteinID:OQU76087
ProteinID:OQU76087.1	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR45605	EnsemblPlantsGene:SORBI_3010G090800	SUPFAM:SSF101941
UniParc:UPI0009DC8676	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:7917103..7917972

Molecular Weight (calculated)

31049.4 Da

IEP (calculated)

6.317

GRAVY (calculated)

-0.490

Length

290 amino acids

Sequence
(BLAST)

001: MELPPVLGFL PGFVFAPEDS DVVVHYLLPR MLGQPLPLDG LIVDEDPLSA PPWELLERNG RREDAFFFAL GQAKSSKGSR QKRTCAGGGF WNGEKTCVDG
101: EKLHVPGGAE VAWRKKALSF QEGGGGGEKG GSTGWVMHEY AITAPDHLAE SQLRLYRIRF SGHGKKRKQR GDGGGGAGDS CGDVPARNEA RRRRVAEDAD
201: ALLHMSSPPP QQPSSSSTVL IGHSCINGAD DHHHHHAAPA TLLAPGIVDT NSDSLGSIDI DELFRLVENY PSPNPRVSPA ATGYDGAHLD

Best Arabidopsis Sequence Match ( AT5G13180.1 )
(BLAST)

001: MDNVKLVKNG VLRLPPGFRF HPTDEELVVQ YLKRKVCSSP LPASIIPEFD VCRADPWDLP GNLEKERYFF STREAKYPNG NRSNRATGSG YWKATGIDKR
101: VVTSRGNQIV GLKKTLVFYK GKPPHGSRTD WIMHEYRLSS SPPSSMGPTQ NWVLCRIFLK KRAGNKNDDD DGDSRNLRHN NNNNSSDQIE IITTDQTDDK
201: TKPIFFDFMR KERTTDLNLL PSSPSSDHAS SGVTTEIFSS SDEETSSCNS FR

Arabidopsis Description

NAC083NAC domain-containing protein 83 [Source:UniProtKB/Swiss-Prot;Acc:Q9FY93]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.