Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G104200.1 | Wheat | nucleus | 82.26 | 83.52 |
| TraesCS5A01G099000.1 | Wheat | nucleus | 82.64 | 81.11 |
| KXG27891 | Sorghum | cytosol | 32.45 | 36.91 |
| OQU82996 | Sorghum | cytosol | 29.06 | 31.95 |
| TraesCS2D01G083700.1 | Wheat | nucleus | 16.6 | 13.37 |
| TraesCS3D01G467000.1 | Wheat | cytosol, nucleus, plastid | 18.87 | 11.63 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G111300.1 | EnsemblPlantsGene:TraesCS5D01G111300 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PANTHER:PTHR45605 |
| PFAM:PF02365 | PFscan:PS51005 | SEG:seg | SUPFAM:SSF101941 | MapMan:15.5.17 | : |
Description
No Description!
Coordinates
chr5D:+:126261214..126262529
Molecular Weight (calculated)
28811.9 Da
IEP (calculated)
8.868
GRAVY (calculated)
-0.582
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MEASRFGFGR DMAAAFKFDP TDADIVASYL LPRAVGLDEP HGREHAVIDD DPMSIPPWDL MEKHNHGTSD QAFFFGPPRN GGRVTRVVPG KGGGTWQGQN
101: GRVGTVTLFC DGARAGEVDI SYRRYDLTYK RAGDKAPSGW VMSEYQITSP PLLSTVLTRI GLIVAAREQR KRQPADPEAF AQQGPHKVLA VAAAATAAEH
201: QRVSPAPVQP GPDPQADDGA LYHGDTSVTG VGENGGHYTV PLLLNGQEYY KDKSRVKRKR RRYGA
101: GRVGTVTLFC DGARAGEVDI SYRRYDLTYK RAGDKAPSGW VMSEYQITSP PLLSTVLTRI GLIVAAREQR KRQPADPEAF AQQGPHKVLA VAAAATAAEH
201: QRVSPAPVQP GPDPQADDGA LYHGDTSVTG VGENGGHYTV PLLLNGQEYY KDKSRVKRKR RRYGA
001: MANPVGFRFR PTDGEIVDIY LRPKNLESNT SHVDEVISTV DICSFDPWDL PSHSRMKTRD QVWYFFGRKE NKYGKGDRQI RKTKSGFWKK TGVTMDIMRK
101: TGDREKIGEK RVLVFKNHGG SKSDWAMHEY HATFSSPNQI MTYTLCKVKF KGERREFSVA TGSGIKHTHS LIPPTNNSGV LSVETEGSLF HSQESQNPSQ
201: FSGFLDVDAL DRDFCNILSD DFKGFFNDDD EQSKIVSMQD DRNNHTPQKP LTGVFSDHST DGSDSDPISA TTISIQTLST CPSFGSSNPL YQITDLQESP
301: NSIKLVSLAQ EVSKTPGTGI DNDAQGTEIG EHKLGQETIK NKRAGFFHRM IQKFVKKIHL RT
101: TGDREKIGEK RVLVFKNHGG SKSDWAMHEY HATFSSPNQI MTYTLCKVKF KGERREFSVA TGSGIKHTHS LIPPTNNSGV LSVETEGSLF HSQESQNPSQ
201: FSGFLDVDAL DRDFCNILSD DFKGFFNDDD EQSKIVSMQD DRNNHTPQKP LTGVFSDHST DGSDSDPISA TTISIQTLST CPSFGSSNPL YQITDLQESP
301: NSIKLVSLAQ EVSKTPGTGI DNDAQGTEIG EHKLGQETIK NKRAGFFHRM IQKFVKKIHL RT
Arabidopsis Description
NAC005NAC domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:O81914]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.