Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G471300.1 | Wheat | cytosol | 67.91 | 67.44 |
| OQU89927 | Sorghum | nucleus | 18.14 | 23.85 |
| OQU86599 | Sorghum | nucleus | 19.3 | 23.38 |
| TraesCS2D01G083700.1 | Wheat | nucleus | 15.12 | 19.76 |
| TraesCS5D01G111300.1 | Wheat | nucleus | 11.63 | 18.87 |
| Os02t0285900-00 | Rice | nucleus | 20.23 | 17.3 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G467000.1 | EnsemblPlantsGene:TraesCS3D01G467000 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PANTHER:PTHR45605 |
| PFAM:PF02365 | PFscan:PS51005 | SEG:seg | SUPFAM:SSF101941 | MapMan:15.5.17 | : |
Description
No Description!
Coordinates
chr3D:+:570158391..570159908
Molecular Weight (calculated)
47374.0 Da
IEP (calculated)
4.141
GRAVY (calculated)
-0.489
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPVAEIWGL TPGYKFMPAD EEVIEFYLIP RLRGQPLPLD GVIIDEDPRS APPWKLFERN GLDEVDVEHA FFFTSGEYAK SAKRKVRACA GGTWVGMKVG
101: NKGKLRLGGE TFAWQVYRMN YQWGAGRRTG STGWVMLEYS IVAPADCASI KVCKISFSGY GQKRQRVPDG YVDDCHSGRA ATRPLAAALP SSTTKCYSEP
201: QDEDAGGEGE ADSTWTYQEP FTAAQQFDDQ DTQPLIDVGC LPGFSSTPPV PVSAVDDGMM QSQMFSYAVA EGEAEPTRNY EELYTETTTQ QFDGQAMQPP
301: ADVGGFPSTS TASGMDDGTI MPLQIDQETH SPEKFVDYGT VPPLTNQEFC MPEKYVPIPP VIDHEAGPPQ EQFFDVEDPE LQVLLESFSD FATAGQNDPG
401: FGDYFASAGQ DYDLNHHVLP KNSFNQHQVF
101: NKGKLRLGGE TFAWQVYRMN YQWGAGRRTG STGWVMLEYS IVAPADCASI KVCKISFSGY GQKRQRVPDG YVDDCHSGRA ATRPLAAALP SSTTKCYSEP
201: QDEDAGGEGE ADSTWTYQEP FTAAQQFDDQ DTQPLIDVGC LPGFSSTPPV PVSAVDDGMM QSQMFSYAVA EGEAEPTRNY EELYTETTTQ QFDGQAMQPP
301: ADVGGFPSTS TASGMDDGTI MPLQIDQETH SPEKFVDYGT VPPLTNQEFC MPEKYVPIPP VIDHEAGPPQ EQFFDVEDPE LQVLLESFSD FATAGQNDPG
401: FGDYFASAGQ DYDLNHHVLP KNSFNQHQVF
001: MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK ICNKPFKFDA ISVTDVYKSE PWDLPDKSRL KSRDLEWYFF SMLDKKYRNG SKTNRATEMG YWKTTGKDRE
101: ILNGSKVVGM KKTLVYHKGR APRGERTNWV MHEYRLVDQD LDKTGVHQDA FVLCRIFQKS GSGPKNGEQY GAPFVEEEWE EEDDMTFVPD QEDLGSEDHV
201: YVHMDDIDQK SENFVVYDAI PIPLNFIHGE SSNNVETNYS DSINYIQQTG NYMDSGGYFE QPAESYEKDQ KPIIRDRDGS LQNEGIGCGV QDKHSETLQS
301: SDNIFGTDTS CYNDFPVESN YLIGEAFLDP NSNLLENDGL YLETNDLSST QQDGFDFEDY LTFFDETFDP SQLMGNEDVF FDQEELFQEV ETKELEKEET
401: SRSKHVVEEK EKDEASCSKQ VDADATEFEP DYKYPLLKKA SHMLGAIPAP LANASEFPTK DAAIRLHAAQ SSGSVHVTAG MITISDSNMG WSYGKNENLD
501: LILSLGLVQG NTAPEKSGNS SAWAMLIFMC FWVLLLSVSF KVSILVSSR
101: ILNGSKVVGM KKTLVYHKGR APRGERTNWV MHEYRLVDQD LDKTGVHQDA FVLCRIFQKS GSGPKNGEQY GAPFVEEEWE EEDDMTFVPD QEDLGSEDHV
201: YVHMDDIDQK SENFVVYDAI PIPLNFIHGE SSNNVETNYS DSINYIQQTG NYMDSGGYFE QPAESYEKDQ KPIIRDRDGS LQNEGIGCGV QDKHSETLQS
301: SDNIFGTDTS CYNDFPVESN YLIGEAFLDP NSNLLENDGL YLETNDLSST QQDGFDFEDY LTFFDETFDP SQLMGNEDVF FDQEELFQEV ETKELEKEET
401: SRSKHVVEEK EKDEASCSKQ VDADATEFEP DYKYPLLKKA SHMLGAIPAP LANASEFPTK DAAIRLHAAQ SSGSVHVTAG MITISDSNMG WSYGKNENLD
501: LILSLGLVQG NTAPEKSGNS SAWAMLIFMC FWVLLLSVSF KVSILVSSR
Arabidopsis Description
NAC053NAC domain-containing protein 53 [Source:UniProtKB/Swiss-Prot;Acc:Q949N0]
SUBAcon: [vacuole,nucleus,cytosol]
SUBAcon: [vacuole,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.