Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G467000.1 | Wheat | cytosol, nucleus, plastid | 67.44 | 67.91 |
| TraesCS6A01G392900.1 | Wheat | cytosol, mitochondrion, nucleus | 9.93 | 23.89 |
| OQU86599 | Sorghum | nucleus | 18.71 | 22.82 |
| OQU89927 | Sorghum | nucleus | 16.4 | 21.71 |
| TraesCS5A01G099000.1 | Wheat | nucleus | 13.16 | 21.11 |
| Os02t0285900-00 | Rice | nucleus | 20.09 | 17.3 |
| TraesCS3A01G113300.1 | Wheat | nucleus | 16.17 | 16.63 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G471300.1 | EnsemblPlantsGene:TraesCS3A01G471300 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PANTHER:PTHR45605 |
| PFAM:PF02365 | PFscan:PS51005 | SEG:seg | SUPFAM:SSF101941 | MapMan:15.5.17 | : |
Description
No Description!
Coordinates
chr3A:+:702962612..702964422
Molecular Weight (calculated)
47949.7 Da
IEP (calculated)
4.235
GRAVY (calculated)
-0.501
Length
433 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPAAEIRGL TPGYKFMPTD EEVIAFYLIP RLRGQPLPLD GVIIDEDPRS APPWKLFERN GLDEVDVEHA FFSASGEYAK SAKRKVRAYA GGTWVGMKVG
101: NKGKLRLGGE TFAWQVYRMN YQLGVGRRTG STGWVMLEYS IKAPADCASI KVCKISFSGY GQKRKRVPDG YVNDCDSARA ATRRLAAALP SSTTTCYSEP
201: RDEDAGGEGE ADSTWTYQEP FTAATTTTAQ QFDDQDTQPL VDVDFLPGFS STFPASAVDD GMMQPQVFSY VVVEGEAEPT RNYEEPYTET TTQQFDDQTM
301: QPPADVGGFP STSTASGMDD GIIMPLQIDQ ETHFPEKFVE YGTVPPLTNR EFCMPEKYVP IQPVIDHEAG LPQEQFFDVE DPELQVLLES FSDFATAGQN
401: DPGFGDYFAS AGQDYDLNHH VLPKNSFNQH QVF
101: NKGKLRLGGE TFAWQVYRMN YQLGVGRRTG STGWVMLEYS IKAPADCASI KVCKISFSGY GQKRKRVPDG YVNDCDSARA ATRRLAAALP SSTTTCYSEP
201: RDEDAGGEGE ADSTWTYQEP FTAATTTTAQ QFDDQDTQPL VDVDFLPGFS STFPASAVDD GMMQPQVFSY VVVEGEAEPT RNYEEPYTET TTQQFDDQTM
301: QPPADVGGFP STSTASGMDD GIIMPLQIDQ ETHFPEKFVE YGTVPPLTNR EFCMPEKYVP IQPVIDHEAG LPQEQFFDVE DPELQVLLES FSDFATAGQN
401: DPGFGDYFAS AGQDYDLNHH VLPKNSFNQH QVF
001: MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK ICNKPFKFDA ISVTDVYKSE PWDLPDKSRL KSRDLEWYFF SMLDKKYRNG SKTNRATEMG YWKTTGKDRE
101: ILNGSKVVGM KKTLVYHKGR APRGERTNWV MHEYRLVDQD LDKTGVHQDA FVLCRIFQKS GSGPKNGEQY GAPFVEEEWE EEDDMTFVPD QEDLGSEDHV
201: YVHMDDIDQK SENFVVYDAI PIPLNFIHGE SSNNVETNYS DSINYIQQTG NYMDSGGYFE QPAESYEKDQ KPIIRDRDGS LQNEGIGCGV QDKHSETLQS
301: SDNIFGTDTS CYNDFPVESN YLIGEAFLDP NSNLLENDGL YLETNDLSST QQDGFDFEDY LTFFDETFDP SQLMGNEDVF FDQEELFQEV ETKELEKEET
401: SRSKHVVEEK EKDEASCSKQ VDADATEFEP DYKYPLLKKA SHMLGAIPAP LANASEFPTK DAAIRLHAAQ SSGSVHVTAG MITISDSNMG WSYGKNENLD
501: LILSLGLVQG NTAPEKSGNS SAWAMLIFMC FWVLLLSVSF KVSILVSSR
101: ILNGSKVVGM KKTLVYHKGR APRGERTNWV MHEYRLVDQD LDKTGVHQDA FVLCRIFQKS GSGPKNGEQY GAPFVEEEWE EEDDMTFVPD QEDLGSEDHV
201: YVHMDDIDQK SENFVVYDAI PIPLNFIHGE SSNNVETNYS DSINYIQQTG NYMDSGGYFE QPAESYEKDQ KPIIRDRDGS LQNEGIGCGV QDKHSETLQS
301: SDNIFGTDTS CYNDFPVESN YLIGEAFLDP NSNLLENDGL YLETNDLSST QQDGFDFEDY LTFFDETFDP SQLMGNEDVF FDQEELFQEV ETKELEKEET
401: SRSKHVVEEK EKDEASCSKQ VDADATEFEP DYKYPLLKKA SHMLGAIPAP LANASEFPTK DAAIRLHAAQ SSGSVHVTAG MITISDSNMG WSYGKNENLD
501: LILSLGLVQG NTAPEKSGNS SAWAMLIFMC FWVLLLSVSF KVSILVSSR
Arabidopsis Description
NAC053NAC domain-containing protein 53 [Source:UniProtKB/Swiss-Prot;Acc:Q949N0]
SUBAcon: [vacuole,nucleus,cytosol]
SUBAcon: [vacuole,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.