Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G124100.2 | Wheat | mitochondrion | 69.91 | 88.27 |
| TraesCS7A01G435800.1 | Wheat | mitochondrion | 86.28 | 84.78 |
| TraesCS6B01G184700.1 | Wheat | mitochondrion | 72.12 | 83.16 |
| TraesCS4B01G195700.1 | Wheat | nucleus | 52.65 | 55.09 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G038400.2 | EnsemblPlantsGene:TraesCS6D01G038400 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF33 | SEG:seg | MapMan:15.5.32 |
Description
No Description!
Coordinates
chr6D:+:16118058..16120235
Molecular Weight (calculated)
24824.7 Da
IEP (calculated)
9.929
GRAVY (calculated)
-0.350
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MMHRQWRGAG TRGRMGISYL HSHGGGNVDA MAQQRRLGSL WSFLRQQDVG ESIAAGNGSS DLLRIFSMST CDDTNSNIIF SAPGSKKAEV LGDSDVGMVT
101: SFSNIDSQIR LALSSWTCPA WTTTCSCSRT PPTAESTPSV AAPLTRRASL GRERRTRINK RLRRLQDLIP YMDKVTRPIH IQEICDQLPQ GPASSTQDIL
201: CPKPYRIMPS LISAVGMTAS NFSLQY
101: SFSNIDSQIR LALSSWTCPA WTTTCSCSRT PPTAESTPSV AAPLTRRASL GRERRTRINK RLRRLQDLIP YMDKVTRPIH IQEICDQLPQ GPASSTQDIL
201: CPKPYRIMPS LISAVGMTAS NFSLQY
001: MQPTSVGSSG GGDDGGGRGG GGGLSRSGLS RIRSAPATWL EALLEEDEEE SLKPNLGLTD LLTGNSNDLP TSRGSFEFPI PVEQGLYQQG GFHRQNSTPA
101: DFLSGSDGFI QSFGIQANYD YLSGNIDVSP GSKRSREMEA LFSSPEFTSQ MKGEQSSGQV PTGVSSMSDM NMENLMEDSV AFRVRAKRGC ATHPRSIAER
201: VRRTRISDRI RKLQELVPNM DKQTNTADML EEAVEYVKVL QRQIQELTEE QKRCTCIPKE EQ
101: DFLSGSDGFI QSFGIQANYD YLSGNIDVSP GSKRSREMEA LFSSPEFTSQ MKGEQSSGQV PTGVSSMSDM NMENLMEDSV AFRVRAKRGC ATHPRSIAER
201: VRRTRISDRI RKLQELVPNM DKQTNTADML EEAVEYVKVL QRQIQELTEE QKRCTCIPKE EQ
Arabidopsis Description
BHLH81Transcription factor bHLH81 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0R0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.