Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G184700.1 | Wheat | mitochondrion | 77.09 | 70.41 |
| TraesCS6D01G038400.2 | Wheat | mitochondrion | 88.27 | 69.91 |
| TraesCS7A01G435800.1 | Wheat | mitochondrion | 89.39 | 69.57 |
| TraesCS4B01G195700.1 | Wheat | nucleus | 61.45 | 50.93 |
| TraesCS5B01G118500.1 | Wheat | cytosol | 24.02 | 38.74 |
| TraesCS5B01G328700.1 | Wheat | cytosol | 23.46 | 37.84 |
| TraesCS7B01G121000.2 | Wheat | cytosol | 26.26 | 21.76 |
| TraesCS3B01G240100.1 | Wheat | cytosol | 26.82 | 20.96 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G124100.2 | EnsemblPlantsGene:TraesCS4B01G124100 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF33 | SEG:seg | MapMan:15.5.32 |
Description
No Description!
Coordinates
chr4B:-:148993806..148998549
Molecular Weight (calculated)
19860.7 Da
IEP (calculated)
9.890
GRAVY (calculated)
-0.372
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGMRGRMGI SYLHSHGGGN IDAMARQRRL GSLWSFLRQQ DVGESIAAGN GSRDLLRIFS MSTWDDTNSN IMFSAPDSKK AEVLGDSNVC MVTSFSNIDA
101: QIQLSLSSWT CPAWTTTCSC SRTPPTAEST PSVAAQLTHR TSLGRERRTR INKRLRRLQD LIPYMDKVTR IFCVPSPIE
101: QIQLSLSSWT CPAWTTTCSC SRTPPTAEST PSVAAQLTHR TSLGRERRTR INKRLRRLQD LIPYMDKVTR IFCVPSPIE
001: MYQSSSSTSS SSQRSSLPGG GGLIRYGSAP GSFLNSVVDE VIGGGSSNAR DFTGYQPSSD NFIGNFFTGA ADSSSLRSDS TTCGVNNSSD GQKQLGNNNN
101: NNSNKDIFLD RSYGGFNEIS QQHKSNDIGG GNSSGSYSLA RQRSSPADFF TYLASDKNNF SLNQPTSDYS PQGGSNGGRG HSRLKSQLSF TNHDSLARIN
201: EVNETPVHDG SGHSFSAASF GAATTDSWDD GSGSIGFTVT RPSKRSKDMD SGLFSQYSLP SDTSMNYMDN FMQLPEDSVP CKIRAKRGCA THPRSIAERE
301: RRTRISGKLK KLQDLVPNMD KQTSYSDMLD LAVQHIKGLQ HQLQNLKKDQ ENCTCGCSEK PS
101: NNSNKDIFLD RSYGGFNEIS QQHKSNDIGG GNSSGSYSLA RQRSSPADFF TYLASDKNNF SLNQPTSDYS PQGGSNGGRG HSRLKSQLSF TNHDSLARIN
201: EVNETPVHDG SGHSFSAASF GAATTDSWDD GSGSIGFTVT RPSKRSKDMD SGLFSQYSLP SDTSMNYMDN FMQLPEDSVP CKIRAKRGCA THPRSIAERE
301: RRTRISGKLK KLQDLVPNMD KQTSYSDMLD LAVQHIKGLQ HQLQNLKKDQ ENCTCGCSEK PS
Arabidopsis Description
BHLH128Transcription factor bHLH128 [Source:UniProtKB/Swiss-Prot;Acc:Q8H102]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.