Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G328700.1 | Wheat | cytosol | 90.09 | 90.09 |
| TraesCS5A01G535200.1 | Wheat | plastid | 59.46 | 42.86 |
| TraesCS2A01G227800.1 | Wheat | cytosol, mitochondrion | 52.25 | 30.21 |
| TraesCS7B01G121000.2 | Wheat | cytosol | 46.85 | 24.07 |
| TraesCS4B01G124100.2 | Wheat | mitochondrion | 38.74 | 24.02 |
| TraesCS3B01G240100.1 | Wheat | cytosol | 47.75 | 23.14 |
| TraesCS6B01G184700.1 | Wheat | mitochondrion | 38.74 | 21.94 |
| TraesCS4B01G195700.1 | Wheat | nucleus | 37.84 | 19.44 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G118500.1 | EnsemblPlantsGene:TraesCS5B01G118500 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF33 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr5B:-:208767718..208768155
Molecular Weight (calculated)
12134.7 Da
IEP (calculated)
6.503
GRAVY (calculated)
-0.141
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMAMPIPML PADVGESITA DNGSNELSMS SWDDTNSNIM FFVPGSKKAK VFIDGDNGMV TKFSKIKSQF GLSSMSLDMP GMDGYLQPQQ DFVACIVLRQ
101: ACLRHSPVKH R
101: ACLRHSPVKH R
001: VYLVFTTNDF PWLTIIVVFP ISAGSLMLFL PHRGNKVNKW YTICICILEL LLTTYAFCYN FKMDDPLIQL SEDYKWIDFF DFYWRMGIDG LSIGTILLTG
101: FITTLATLAA FPVTRDSRFF HFLMLAMYSG QIGSFSSRDL LLFFIMWELE LIPVYLLLSM WGGKKRLYSA TKFILYTAGS SIFLLIGVLG ISLYGSNEPT
201: LNLELLANKS YPVTLEILFY IGFLIAFAVK SPIIPLHTWL PDTHGEAHYS TCMLLAGILL KMGAYGLVRI NMELLPHAHS MFSPWLLVVG TIQIIYAAST
301: SPGQRNLKKR IAYSSVSHMG FIIIGISSIT DPGLNGAILQ IISHGFIGAA LFFLAGTSYD RIRLVYLDEM GGMAISIPKI FTMFTILSMA SLALPGMSGF
401: IAEFIVFFGI ITSQKYFLIS KIFIIFVMAI GMILTPIYLL SMLRQMFYGY KLINIKNFSF FDSGPRELFL SISILLPIIG IGIYPDFVLS LASDKVESIL
501: SNYFYG
101: FITTLATLAA FPVTRDSRFF HFLMLAMYSG QIGSFSSRDL LLFFIMWELE LIPVYLLLSM WGGKKRLYSA TKFILYTAGS SIFLLIGVLG ISLYGSNEPT
201: LNLELLANKS YPVTLEILFY IGFLIAFAVK SPIIPLHTWL PDTHGEAHYS TCMLLAGILL KMGAYGLVRI NMELLPHAHS MFSPWLLVVG TIQIIYAAST
301: SPGQRNLKKR IAYSSVSHMG FIIIGISSIT DPGLNGAILQ IISHGFIGAA LFFLAGTSYD RIRLVYLDEM GGMAISIPKI FTMFTILSMA SLALPGMSGF
401: IAEFIVFFGI ITSQKYFLIS KIFIIFVMAI GMILTPIYLL SMLRQMFYGY KLINIKNFSF FDSGPRELFL SISILLPIIG IGIYPDFVLS LASDKVESIL
501: SNYFYG
Arabidopsis Description
NDHDNADH-Ubiquinone/plastoquinone (complex I) protein [Source:TAIR;Acc:ATCG01050]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.