Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G118500.1 | Wheat | cytosol | 90.09 | 90.09 |
| TraesCS5A01G535200.1 | Wheat | plastid | 58.56 | 42.21 |
| TraesCS2A01G227800.1 | Wheat | cytosol, mitochondrion | 50.45 | 29.17 |
| TraesCS4B01G124100.2 | Wheat | mitochondrion | 37.84 | 23.46 |
| TraesCS7B01G121000.2 | Wheat | cytosol | 44.14 | 22.69 |
| TraesCS6B01G184700.1 | Wheat | mitochondrion | 37.84 | 21.43 |
| TraesCS3B01G240100.1 | Wheat | cytosol | 43.24 | 20.96 |
| TraesCS4B01G195700.1 | Wheat | nucleus | 38.74 | 19.91 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G328700.1 | EnsemblPlantsGene:TraesCS5B01G328700 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF33 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr5B:-:512583942..512584379
Molecular Weight (calculated)
11996.3 Da
IEP (calculated)
6.225
GRAVY (calculated)
-0.229
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMAIPAPMT PADVSESITT DNGSNELSMS SWDDTNSNIM FFAPGSKKAK VLINGDNGMV TNFSKIKSQF GLSSTSLDMP GMDGYLQPQQ DFVACIVLRQ
101: ACLRHSPVKH H
101: ACLRHSPVKH H
001: MEEGTGFSLG RPNGGYGGGG EQGPSRLKSE LRFSSGSSSH QEHNSLPRIS EVEAAAAARN GVASSSMSFG NNRTNNWDNS SSHISFTIDQ PGKRSKNSDF
101: FTLETQYSMP QTTLEMATME NLMNIPEDSV PCRARAKRGF ATHPRSIAER ERRTRISGKL KKLQELVPNM DKQTSYADML DLAVEHIKGL QHQVESLEKG
201: MERCTCGACK KR
101: FTLETQYSMP QTTLEMATME NLMNIPEDSV PCRARAKRGF ATHPRSIAER ERRTRISGKL KKLQELVPNM DKQTSYADML DLAVEHIKGL QHQVESLEKG
201: MERCTCGACK KR
Arabidopsis Description
Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IQ66]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.