Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G124100.2 | Wheat | mitochondrion | 50.93 | 61.45 |
| TraesCS6D01G038400.2 | Wheat | mitochondrion | 55.09 | 52.65 |
| TraesCS7A01G435800.1 | Wheat | mitochondrion | 53.7 | 50.43 |
| TraesCS6B01G184700.1 | Wheat | mitochondrion | 43.52 | 47.96 |
| TraesCS5B01G328700.1 | Wheat | cytosol | 19.91 | 38.74 |
| TraesCS5B01G118500.1 | Wheat | cytosol | 19.44 | 37.84 |
| TraesCS7B01G121000.2 | Wheat | cytosol | 19.44 | 19.44 |
| TraesCS3B01G240100.1 | Wheat | cytosol | 19.44 | 18.34 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G195700.1 | EnsemblPlantsGene:TraesCS4B01G195700 | PANTHER:PTHR16223 | PANTHER:PTHR16223:SF33 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr4B:-:421857301..421859276
Molecular Weight (calculated)
24347.0 Da
IEP (calculated)
10.993
GRAVY (calculated)
-0.701
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSPGNSLL QKCRERLRTI DPKWSDPSLD PAQAGATCTR QWRHGWNERK DGNQLLAFAQ RRQRRRDGTA EEVGLVVELL EAAGRRREHR CRQRLNRSSD
101: LLRIFSMSTW DDTNSNIMFS APGSKKAEVL GDNDVGMVTS FSNIGSQIQL ALSSCTCPAW TTTCSCSRTP PTAESTPSVA VPLTRRALLG RETRTRINKR
201: LRRLQDLIPY MDKVTR
101: LLRIFSMSTW DDTNSNIMFS APGSKKAEVL GDNDVGMVTS FSNIGSQIQL ALSSCTCPAW TTTCSCSRTP PTAESTPSVA VPLTRRALLG RETRTRINKR
201: LRRLQDLIPY MDKVTR
001: MYQSSSSTSS SSQRSSLPGG GGLIRYGSAP GSFLNSVVDE VIGGGSSNAR DFTGYQPSSD NFIGNFFTGA ADSSSLRSDS TTCGVNNSSD GQKQLGNNNN
101: NNSNKDIFLD RSYGGFNEIS QQHKSNDIGG GNSSGSYSLA RQRSSPADFF TYLASDKNNF SLNQPTSDYS PQGGSNGGRG HSRLKSQLSF TNHDSLARIN
201: EVNETPVHDG SGHSFSAASF GAATTDSWDD GSGSIGFTVT RPSKRSKDMD SGLFSQYSLP SDTSMNYMDN FMQLPEDSVP CKIRAKRGCA THPRSIAERE
301: RRTRISGKLK KLQDLVPNMD KQTSYSDMLD LAVQHIKGLQ HQLQNLKKDQ ENCTCGCSEK PS
101: NNSNKDIFLD RSYGGFNEIS QQHKSNDIGG GNSSGSYSLA RQRSSPADFF TYLASDKNNF SLNQPTSDYS PQGGSNGGRG HSRLKSQLSF TNHDSLARIN
201: EVNETPVHDG SGHSFSAASF GAATTDSWDD GSGSIGFTVT RPSKRSKDMD SGLFSQYSLP SDTSMNYMDN FMQLPEDSVP CKIRAKRGCA THPRSIAERE
301: RRTRISGKLK KLQDLVPNMD KQTSYSDMLD LAVQHIKGLQ HQLQNLKKDQ ENCTCGCSEK PS
Arabidopsis Description
BHLH128Transcription factor bHLH128 [Source:UniProtKB/Swiss-Prot;Acc:Q8H102]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.