Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G121000.2 | Wheat | cytosol | 86.46 | 91.67 |
| TraesCS5B01G118500.1 | Wheat | cytosol | 23.14 | 47.75 |
| TraesCS5B01G328700.1 | Wheat | cytosol | 20.96 | 43.24 |
| TraesCS4B01G124100.2 | Wheat | mitochondrion | 20.96 | 26.82 |
| TraesCS6B01G184700.1 | Wheat | mitochondrion | 22.71 | 26.53 |
| TraesCS4B01G195700.1 | Wheat | nucleus | 18.34 | 19.44 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G240100.1 | EnsemblPlantsGene:TraesCS3B01G240100 | SEG:seg | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr3B:-:378720197..378722909
Molecular Weight (calculated)
26063.4 Da
IEP (calculated)
10.630
GRAVY (calculated)
-0.456
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MMPHITEIKM AMRMPMPPAD IGESVTAGNG SSDLSRIFSM SYWKDTNSSI MFFTPGRKKA KLFGDSDDGM VTSFSNIDSQ ERTSINKRVR RLQNLMTNMD
101: KVIVRYRNFT LNLSLQVDQR VDRCRREDRA GGWNRRQWTI LTLENGRISI GGSLFTWTML GIFCGPSSLQ NNAQSNLNSG HDSLKLLFST LKKRFTRISG
201: HALRKRNCYA DDALHARQLH DVNLAICCT
101: KVIVRYRNFT LNLSLQVDQR VDRCRREDRA GGWNRRQWTI LTLENGRISI GGSLFTWTML GIFCGPSSLQ NNAQSNLNSG HDSLKLLFST LKKRFTRISG
201: HALRKRNCYA DDALHARQLH DVNLAICCT
001: MQSTHISGGS SGGGGGGGGE VSRSGLSRIR SAPATWIETL LEEDEEEGLK PNLCLTELLT GNNNSGGVIT SRDDSFEFLS SVEQGLYNHH QGGGFHRQNS
101: SPADFLSGSG SGTDGYFSNF GIPANYDYLS TNVDISPTKR SRDMETQFSS QLKEEQMSGG ISGMMDMNMD KIFEDSVPCR VRAKRGCATH PRSIAERVRR
201: TRISDRIRRL QELVPNMDKV NSFYKADWF
101: SPADFLSGSG SGTDGYFSNF GIPANYDYLS TNVDISPTKR SRDMETQFSS QLKEEQMSGG ISGMMDMNMD KIFEDSVPCR VRAKRGCATH PRSIAERVRR
201: TRISDRIRRL QELVPNMDKV NSFYKADWF
Arabidopsis Description
BHLH80Transcription factor bHLH80 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8P8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.