Factsheet for TraesCSU01G015000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G158900.1	Wheat	cytosol	100.0	43.25
TraesCS2A01G135000.1	Wheat	endoplasmic reticulum, vacuole	90.07	33.87
HORVU2Hr1G023770.2	Barley	extracellular, golgi	88.65	33.51
TraesCS2D01G137500.2	Wheat	mitochondrion, vacuole	85.82	32.61
TraesCSU01G215000.1	Wheat	extracellular, vacuole	80.85	30.48
KXG31571	Sorghum	extracellular, plasma membrane, plastid	57.45	20.4
GSMUA_Achr10P...	Banana	extracellular, vacuole	46.81	17.84
TraesCSU01G095400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	42.55	16.62
KRH54432	Soybean	extracellular, plasma membrane, vacuole	34.75	16.61
PGSC0003DMT400011187	Potato	plasma membrane	41.84	15.86
KRH10999	Soybean	extracellular	41.84	15.78
Solyc03g006240.2.1	Tomato	nucleus	40.43	15.49
KRH21298	Soybean	nucleus	41.13	14.8
TraesCSU01G168000.1	Wheat	extracellular, golgi, vacuole	38.3	14.59
TraesCSU01G158200.1	Wheat	extracellular, golgi, vacuole	38.3	14.59
KRH32795	Soybean	extracellular	36.88	14.44
KRH63839	Soybean	vacuole	37.59	14.25
AT5G45910.1	Thale cress	extracellular	37.59	14.25
Bra034320.1-P	Field mustard	extracellular	36.88	13.68
KRG93967	Soybean	vacuole	34.04	13.37
TraesCSU01G177500.2	Wheat	endoplasmic reticulum, extracellular, vacuole	36.17	13.25
TraesCSU01G219900.1	Wheat	endoplasmic reticulum, extracellular, vacuole	36.17	13.25
CDY48195	Canola	vacuole	36.88	13.0
CDX77066	Canola	extracellular	36.88	12.94
TraesCSU01G169100.1	Wheat	extracellular, golgi	35.46	12.85
VIT_10s0003g01010.t01	Wine grape	cytosol	41.13	7.74
TraesCSU01G173600.1	Wheat	extracellular	15.6	7.24

Protein Annotations

EnsemblPlants:TraesCSU01G015000.1	EnsemblPlantsGene:TraesCSU01G015000	Gene3D:3.40.50.1110	InterPro:IPR036514	InterPro:SGNH_hydro_sf	PANTHER:PTHR22835
PANTHER:PTHR22835:SF280	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:17378057..17378594

Molecular Weight (calculated)

15733.9 Da

IEP (calculated)

8.714

GRAVY (calculated)

-0.426

Length

141 amino acids

Sequence
(BLAST)

001: MLASPNKMEY DRHGCLKSGN RLGRSQNSLL RQRIKMLRHK YPHTKIIATE YYRPILAFLD MPGHFGLNNS TTLLTCCGAG GPPYNYDFNT GCGLPGVKAC
101: TDPSQALQWD GFHLTESAYR AIADGWLHGP YADPTIMDIA R

Best Arabidopsis Sequence Match ( AT1G28600.1 )
(BLAST)

001: MASLDSLVIF LFSTLFVTIV SSETPCPNFK SIISFGDSIA DTGNLVGLSD RNQLPVTAFP PYGETFFHHP TGRSCDGRII MDFIAEFVGL PYVPPYFGSK
101: NRNFDKGVNF AVAGATALKS SFLKKRGIQP HTNVSLGVQL KSFKKSLPNL CGSPSDCRDM IGNALILMGE IGGNDYNFPF FNRKPVKEVE ELVPFVIASI
201: SSTITELIGM GGKTFLVPGE FPIGCSVVYL TLYKTSNKDE YDPSTGCLKW LNKFGEYHSE KLKVELNRLR KLYPHVNIIY ADYYNSLLRI FKEPAKFGFM
301: ERPFPACCGI GGPYNFNFTR KCGSVGVKSC KDPSKYVGWD GVHMTEAAYK WIADGILNGP YANPPFDRSC LRSEIKKESL YNQSTLTQAC VKL

Arabidopsis Description

GDSL esterase/lipase At1g28600 [Source:UniProtKB/Swiss-Prot;Acc:Q94F40]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.