Factsheet for TraesCSU01G173600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G041300.1	Wheat	vacuole	92.11	73.68
HORVU1Hr1G002220.2	Barley	endoplasmic reticulum, golgi	89.14	68.78
TraesCSU01G169100.1	Wheat	extracellular, golgi	79.93	62.47
TraesCSU01G219900.1	Wheat	endoplasmic reticulum, extracellular, vacuole	75.33	59.48
TraesCSU01G177500.2	Wheat	endoplasmic reticulum, extracellular, vacuole	75.33	59.48
GSMUA_Achr10P...	Banana	extracellular, vacuole	42.76	35.14
TraesCSU01G215000.1	Wheat	extracellular, vacuole	40.46	32.89
KRH10999	Soybean	extracellular	39.8	32.35
AT5G45910.1	Thale cress	extracellular	39.14	31.99
Bra034320.1-P	Field mustard	extracellular	39.8	31.84
KRH21298	Soybean	nucleus	40.79	31.63
PGSC0003DMT400011187	Potato	plasma membrane	38.49	31.45
Solyc03g006240.2.1	Tomato	nucleus	37.83	31.25
TraesCSU01G095400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	36.84	31.02
KRH63839	Soybean	vacuole	37.17	30.38
CDY48195	Canola	vacuole	39.8	30.25
CDX77066	Canola	extracellular	39.8	30.1
TraesCSU01G158200.1	Wheat	extracellular, golgi, vacuole	36.51	30.0
TraesCSU01G168000.1	Wheat	extracellular, golgi, vacuole	36.51	30.0
KRG93967	Soybean	vacuole	34.54	29.25
KRH32795	Soybean	extracellular	33.88	28.61
KRH54432	Soybean	extracellular, plasma membrane, vacuole	25.33	26.1
VIT_10s0003g01010.t01	Wine grape	cytosol	43.75	17.76
TraesCSU01G015000.1	Wheat	cytosol	7.24	15.6

Protein Annotations

EnsemblPlants:TraesCSU01G173600.1	EnsemblPlantsGene:TraesCSU01G173600	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	PANTHER:PTHR22835
PANTHER:PTHR22835:SF272	PFAM:PF00657	SEG:seg	SignalP:SignalP-noTM	TIGR:cd01837	MapMan:35.1

Description

No Description!

Coordinates

chrUn:-:260337581..260338756

Molecular Weight (calculated)

33560.2 Da

IEP (calculated)

8.142

GRAVY (calculated)

-0.028

Length

304 amino acids

Sequence
(BLAST)

001: MHTVLCAIFL ILQLSSSMPV ISSPSSARHY KSIFSFGDSL ADTGNGPVIF QRFSIFNPVT RPPYGSTFFG RPSGRDCDGR LIIDFIAENM GLPYVPATQV
101: HNGSFHQGAN FAVAAATTLD ADFYHERGIP GAPSKFPLNT SLGVQLEWFE SMKPSLCRTD RECKEFFGSS LFFVGEFGVN DYHFSFQKKT VQEVRSFVPD
201: IVATISMAIE RLITKHGARS LVVPGVIPSR CSPPILTKFD DASPAAYDSK TGCLKAYNEL GMYHNSLLQA ALSKLQAKHR NVRIIYADYF GPVMDMVESP
301: HKFG

Best Arabidopsis Sequence Match ( AT1G28600.1 )
(BLAST)

001: MASLDSLVIF LFSTLFVTIV SSETPCPNFK SIISFGDSIA DTGNLVGLSD RNQLPVTAFP PYGETFFHHP TGRSCDGRII MDFIAEFVGL PYVPPYFGSK
101: NRNFDKGVNF AVAGATALKS SFLKKRGIQP HTNVSLGVQL KSFKKSLPNL CGSPSDCRDM IGNALILMGE IGGNDYNFPF FNRKPVKEVE ELVPFVIASI
201: SSTITELIGM GGKTFLVPGE FPIGCSVVYL TLYKTSNKDE YDPSTGCLKW LNKFGEYHSE KLKVELNRLR KLYPHVNIIY ADYYNSLLRI FKEPAKFGFM
301: ERPFPACCGI GGPYNFNFTR KCGSVGVKSC KDPSKYVGWD GVHMTEAAYK WIADGILNGP YANPPFDRSC LRSEIKKESL YNQSTLTQAC VKL

Arabidopsis Description

GDSL esterase/lipase At1g28600 [Source:UniProtKB/Swiss-Prot;Acc:Q94F40]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.