Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G536000.1 | Wheat | cytosol | 62.77 | 60.47 |
| TraesCS3A01G497300.1 | Wheat | cytosol | 55.98 | 51.37 |
| TraesCS3A01G497400.1 | Wheat | peroxisome | 52.72 | 49.36 |
| TraesCSU01G057900.1 | Wheat | cytosol | 28.8 | 26.84 |
Protein Annotations
| EnsemblPlants:TraesCSU01G057700.1 | EnsemblPlantsGene:TraesCSU01G057700 | PANTHER:PTHR33165 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrUn:-:45611613..45612719
Molecular Weight (calculated)
40570.4 Da
IEP (calculated)
5.617
GRAVY (calculated)
0.123
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQEVAGGSI TAEWASLQRD LVQLVADCVL STSGVDGYVP MRAVCPSWRS AVAKPSPHAA VADPRFRPRQ WVVLHGADDD QARPLFLDVS TGRFRRLRRP
101: VLGDYILIGA SDGLLVLGDR ERPHAARLLN PLTGDMLPFA APIPPEDWVN TAIVGSEPTI IFAFEPEQSE YQDIPAYCSL QQGSDAVYSA DPTGQLRAVK
201: FHDAAYDKEN LLYLQSMVTH AGNVYVLICG GTLCKVVWTG GHWYAELIME IDMPKHCYTG CLVEFAGKLL LVNDKVETIE LLCVDVNRKV LEPIQSIGRC
301: ALFLSVGKCM VVNADKLPTI MRNCIYMNFN DTTYVCMTSV MVGKHTSPTP GCLQMVLELK VISFMKAL
101: VLGDYILIGA SDGLLVLGDR ERPHAARLLN PLTGDMLPFA APIPPEDWVN TAIVGSEPTI IFAFEPEQSE YQDIPAYCSL QQGSDAVYSA DPTGQLRAVK
201: FHDAAYDKEN LLYLQSMVTH AGNVYVLICG GTLCKVVWTG GHWYAELIME IDMPKHCYTG CLVEFAGKLL LVNDKVETIE LLCVDVNRKV LEPIQSIGRC
301: ALFLSVGKCM VVNADKLPTI MRNCIYMNFN DTTYVCMTSV MVGKHTSPTP GCLQMVLELK VISFMKAL
001: MADWSTLPVD LLNMIAGRLF SNIELKRFRS ICRSWRSSVP GAGKKNPFRT RPLILLNPNP NKPLTDHRRR GEFLSRSAFF RVTLSSSPSQ GWLIKSDVDV
101: SSGKLHLLDP LSRLPMEHSR KRVDLSEFTI TEIREAYQVH DWRTRKETRP IFKRVALVKD KEGDNQVLGI RSTGKMMYWD IKTWKAKEEG YEFSDIIVHK
201: GQTYALDSIG IVYWIRSDLK FIRFGPLVGD WTGDRRLVEC CGEFYIVERL VGESTWKRKA DDTGYEYAKT VGFKVYKFDD EQGKMMEVKS LGDKAFVIAT
301: DTCFSVLAHE FYGCLENAIY FTDDTMIKVF KLDNGNGSSI ETTIYPYAQS CFQMFVPSFL
101: SSGKLHLLDP LSRLPMEHSR KRVDLSEFTI TEIREAYQVH DWRTRKETRP IFKRVALVKD KEGDNQVLGI RSTGKMMYWD IKTWKAKEEG YEFSDIIVHK
201: GQTYALDSIG IVYWIRSDLK FIRFGPLVGD WTGDRRLVEC CGEFYIVERL VGESTWKRKA DDTGYEYAKT VGFKVYKFDD EQGKMMEVKS LGDKAFVIAT
301: DTCFSVLAHE FYGCLENAIY FTDDTMIKVF KLDNGNGSSI ETTIYPYAQS CFQMFVPSFL
Arabidopsis Description
AMR1Putative F-box protein At1g65770 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHX9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.