Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G057700.1 | Wheat | cytosol | 51.37 | 55.98 |
| TraesCS3A01G497400.1 | Wheat | peroxisome | 54.61 | 55.73 |
| TraesCS3B01G560200.1 | Wheat | cytosol | 52.87 | 54.22 |
| TraesCS3A01G498000.1 | Wheat | cytosol | 29.43 | 30.03 |
| TraesCS5A01G350400.1 | Wheat | cytosol | 24.94 | 27.7 |
| TraesCS1A01G095900.1 | Wheat | cytosol, plasma membrane, plastid | 17.21 | 21.5 |
| TraesCS6A01G141000.1 | Wheat | cytosol | 16.21 | 19.7 |
| TraesCS3A01G464700.1 | Wheat | cytosol | 18.2 | 18.02 |
| TraesCS3A01G463900.1 | Wheat | plastid | 18.2 | 17.55 |
| TraesCS5A01G442900.1 | Wheat | cytosol | 19.45 | 17.11 |
| TraesCS3A01G464300.1 | Wheat | cytosol | 16.96 | 17.0 |
| TraesCS3A01G464100.1 | Wheat | plastid | 17.21 | 16.79 |
| TraesCS3A01G464200.1 | Wheat | cytosol | 16.46 | 16.67 |
| TraesCS3A01G467500.1 | Wheat | cytosol | 13.97 | 15.73 |
| TraesCS3A01G497100.1 | Wheat | cytosol | 16.46 | 15.35 |
| TraesCS3A01G463800.1 | Wheat | extracellular, vacuole | 6.23 | 10.2 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G497300.1 | EnsemblPlantsGene:TraesCS3A01G497300 | InterPro:DUF295 | PANTHER:PTHR33165 | PFAM:PF03478 | SEG:seg |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:723337491..723338696
Molecular Weight (calculated)
44544.7 Da
IEP (calculated)
6.348
GRAVY (calculated)
-0.057
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEEGGCSSQ KRRPYDPSIT AQWASLQPDL VQHIADCILT TSGVDEYMAM RAVCPTWRSA VAKPSPHAAV ADLRFRPRQW VLLNEADDDQ GRPLFLNVTT
101: GRFRRLRRPV LRDYILVGAS DGLLVLGDTD PPHAARLLNP LTGDMLPFAA PIPREPWAPI PSEPWVDTAV TSSEPTIIFS SQHGSKYLQS GIALYSADPT
201: GQLRVVKLHD AALKKAGLFY LQSMVTYAGN VYVLSSGGTL CKIVWTGEHW YAERILDIDM KYIVALVEAT SKLLLVKEQL ETIEVFSIDV ERKLLEPIKS
301: LGSSALFLSH GNCMVVDADK LPSIKRNCIY STFCTVFSID RIYAWCDLGN GEKKFLTVSH VPVYCPGTES GIIHEGPLSL AEVLLNPYPK VKDQLDHFRE
401: T
101: GRFRRLRRPV LRDYILVGAS DGLLVLGDTD PPHAARLLNP LTGDMLPFAA PIPREPWAPI PSEPWVDTAV TSSEPTIIFS SQHGSKYLQS GIALYSADPT
201: GQLRVVKLHD AALKKAGLFY LQSMVTYAGN VYVLSSGGTL CKIVWTGEHW YAERILDIDM KYIVALVEAT SKLLLVKEQL ETIEVFSIDV ERKLLEPIKS
301: LGSSALFLSH GNCMVVDADK LPSIKRNCIY STFCTVFSID RIYAWCDLGN GEKKFLTVSH VPVYCPGTES GIIHEGPLSL AEVLLNPYPK VKDQLDHFRE
401: T
001: MADWSTLPVD LLNMIAGRLF SNIELKRFRS ICRSWRSSVP GAGKKNPFRT RPLILLNPNP NKPLTDHRRR GEFLSRSAFF RVTLSSSPSQ GWLIKSDVDV
101: SSGKLHLLDP LSRLPMEHSR KRVDLSEFTI TEIREAYQVH DWRTRKETRP IFKRVALVKD KEGDNQVLGI RSTGKMMYWD IKTWKAKEEG YEFSDIIVHK
201: GQTYALDSIG IVYWIRSDLK FIRFGPLVGD WTGDRRLVEC CGEFYIVERL VGESTWKRKA DDTGYEYAKT VGFKVYKFDD EQGKMMEVKS LGDKAFVIAT
301: DTCFSVLAHE FYGCLENAIY FTDDTMIKVF KLDNGNGSSI ETTIYPYAQS CFQMFVPSFL
101: SSGKLHLLDP LSRLPMEHSR KRVDLSEFTI TEIREAYQVH DWRTRKETRP IFKRVALVKD KEGDNQVLGI RSTGKMMYWD IKTWKAKEEG YEFSDIIVHK
201: GQTYALDSIG IVYWIRSDLK FIRFGPLVGD WTGDRRLVEC CGEFYIVERL VGESTWKRKA DDTGYEYAKT VGFKVYKFDD EQGKMMEVKS LGDKAFVIAT
301: DTCFSVLAHE FYGCLENAIY FTDDTMIKVF KLDNGNGSSI ETTIYPYAQS CFQMFVPSFL
Arabidopsis Description
AMR1Putative F-box protein At1g65770 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHX9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.