Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G365300.1 | Wheat | cytosol | 49.53 | 58.52 |
| TraesCS6A01G141000.1 | Wheat | cytosol | 37.91 | 49.39 |
| Zm00001d021115_P001 | Maize | cytosol | 30.0 | 42.72 |
| Zm00001d021097_P001 | Maize | cytosol | 36.05 | 41.33 |
| Zm00001d021117_P001 | Maize | cytosol, plastid | 31.4 | 40.42 |
| Zm00001d021099_P001 | Maize | cytosol, vacuole | 30.23 | 38.92 |
| Zm00001d021107_P001 | Maize | cytosol | 32.79 | 38.74 |
| TraesCS1A01G095900.1 | Wheat | cytosol, plasma membrane, plastid | 28.84 | 38.63 |
| TraesCS3A01G467500.1 | Wheat | cytosol | 31.86 | 38.48 |
| TraesCS3A01G464300.1 | Wheat | cytosol | 35.35 | 38.0 |
| TraesCS3A01G463900.1 | Wheat | plastid | 35.12 | 36.3 |
| Zm00001d021103_P001 | Maize | cytosol | 25.58 | 36.07 |
| TraesCS3A01G464200.1 | Wheat | cytosol | 32.79 | 35.61 |
| TraesCS3A01G464700.1 | Wheat | cytosol | 32.33 | 34.32 |
| TraesCS3A01G463800.1 | Wheat | extracellular, vacuole | 18.14 | 31.84 |
| TraesCS3A01G464100.1 | Wheat | plastid | 29.77 | 31.14 |
| TraesCS5A01G442900.1 | Wheat | cytosol | 31.86 | 30.04 |
| EES02090 | Sorghum | cytosol | 27.44 | 28.5 |
| TraesCS5A01G350400.1 | Wheat | cytosol | 16.51 | 19.67 |
| TraesCS3A01G498000.1 | Wheat | cytosol | 16.74 | 18.32 |
| TraesCS3A01G497400.1 | Wheat | peroxisome | 15.12 | 16.54 |
| TraesCS3A01G497300.1 | Wheat | cytosol | 15.35 | 16.46 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G497100.1 | EnsemblPlantsGene:TraesCS3A01G497100 | InterPro:DUF295 | PANTHER:PTHR33165 | PANTHER:PTHR33165:SF11 | PFAM:PF03478 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:722645549..722648420
Molecular Weight (calculated)
47966.5 Da
IEP (calculated)
5.046
GRAVY (calculated)
0.097
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: MADWSSHQPE LVPRIADCLL DTNDLNSYID FRAVCPNWRS ATDDPKDSSE LRFRPCRWII VDEVFQGDSR LLVNTVSGRV IRKDLPLLHR YDLVATTHGG
101: FFVLADKKTH AAVVLNPFTG HTIRFKAPVP SSVDISDAAL VGLVTGNPEP SLVSELHSSP TLILLSDKFC GQYMAVPGSD SFSVDEEALE SFILFRHAVA
201: GCICAADGWQ RTVPVLLISW VNKLLRLIKV FDIDPFKMFS DALVTGFADI PGTGEANHLF LVESAGELLA IIKLQQHLKV FRLESDEIEP VKSISDLAIF
301: VGYRRCLSVS ADKFPSVLAN CIYFVKSTDS SLDIYQYDLE TEKEERVCEA IDSLNPCTLS FANPPFTIVQ LLSSYTINGL EFQLAMKSFE VHLRNDLLAT
401: ARVGTRMQFM STHELHFHLG YSLSYVPPPE
101: FFVLADKKTH AAVVLNPFTG HTIRFKAPVP SSVDISDAAL VGLVTGNPEP SLVSELHSSP TLILLSDKFC GQYMAVPGSD SFSVDEEALE SFILFRHAVA
201: GCICAADGWQ RTVPVLLISW VNKLLRLIKV FDIDPFKMFS DALVTGFADI PGTGEANHLF LVESAGELLA IIKLQQHLKV FRLESDEIEP VKSISDLAIF
301: VGYRRCLSVS ADKFPSVLAN CIYFVKSTDS SLDIYQYDLE TEKEERVCEA IDSLNPCTLS FANPPFTIVQ LLSSYTINGL EFQLAMKSFE VHLRNDLLAT
401: ARVGTRMQFM STHELHFHLG YSLSYVPPPE
001: MVEKTEYTLP KFIDNVHLYM EHISSRNITE NFYFPPLPKG SQIQNIAMSS CPDINNEDWV MAVKFSGSKL KLYRHNKDFR WIDIETTHES ISPHSSLMYS
101: KKDQRFYVPT PGCNYLCSFD LNFKEKDKLE FVEVRKTDLP KYELFEFMEI NSFTRTDHMV ESSSGEQFLI SWYYGDECKL NYKELTVIHN TKQFKVFREK
201: EELTDRKTKF MSYTENIGDL CIFLGHGEAL CIPASTIPGL KPNCIYFAGH NYGVFDITTQ TCYLFSTDEG LLSSTQFPSW PHPLSLTPN
101: KKDQRFYVPT PGCNYLCSFD LNFKEKDKLE FVEVRKTDLP KYELFEFMEI NSFTRTDHMV ESSSGEQFLI SWYYGDECKL NYKELTVIHN TKQFKVFREK
201: EELTDRKTKF MSYTENIGDL CIFLGHGEAL CIPASTIPGL KPNCIYFAGH NYGVFDITTQ TCYLFSTDEG LLSSTQFPSW PHPLSLTPN
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q5XV21]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.