Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G357400.1 | Wheat | plastid | 35.46 | 35.56 |
| TraesCS3A01G498000.1 | Wheat | cytosol | 33.24 | 30.53 |
| TraesCS3A01G497400.1 | Wheat | peroxisome | 29.64 | 27.23 |
| TraesCS3A01G497300.1 | Wheat | cytosol | 27.7 | 24.94 |
| TraesCS3A01G463900.1 | Wheat | plastid | 24.93 | 21.63 |
| TraesCS6A01G141000.1 | Wheat | cytosol | 19.39 | 21.21 |
| TraesCS3A01G464300.1 | Wheat | cytosol | 22.99 | 20.75 |
| TraesCS3A01G464100.1 | Wheat | plastid | 22.44 | 19.71 |
| TraesCS3A01G464200.1 | Wheat | cytosol | 21.05 | 19.19 |
| TraesCS1A01G095900.1 | Wheat | cytosol, plasma membrane, plastid | 16.07 | 18.07 |
| TraesCS3A01G467500.1 | Wheat | cytosol | 17.17 | 17.42 |
| TraesCS3A01G464700.1 | Wheat | cytosol | 18.56 | 16.54 |
| TraesCS3A01G497100.1 | Wheat | cytosol | 19.67 | 16.51 |
| TraesCS5A01G442900.1 | Wheat | cytosol | 20.78 | 16.45 |
| TraesCS3A01G463800.1 | Wheat | extracellular, vacuole | 7.2 | 10.61 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G350400.1 | EnsemblPlantsGene:TraesCS5A01G350400 | InterPro:DUF295 | PANTHER:PTHR33165 | PFAM:PF03478 | MapMan:35.2 |
Description
No Description!
Coordinates
chr5A:-:553334970..553336055
Molecular Weight (calculated)
40756.3 Da
IEP (calculated)
8.727
GRAVY (calculated)
0.008
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMAADWSSL PSNFVRAVAD VFLATTDLDY YMTLRSVCHG WRAATADPHG TDPRFHPRRW IMLEETRPDV DQDSRLFLNL DTGRFLRKRL SVLRSYTYLA
101: TASGLLVLEE PDMCRLCVLN PFTGTLFRFR VPPVHPFDRS VVVAGSSPMV LFSFYNFHHL AWADQNCVFF PPLVKPTPAL RGFTAVVAFQ GRVYAAHSSG
201: SVALVELSRR HNKPQITVIV PSSNWQATPT LLVDNAGELL LLRIPVYSRM EVFRVDLVRK TLVPVNSIGN RALFLGLRCS LSVDADRLPA VDANFIYYGE
301: GLMCEAGVCA HRLGDDRSFI ERWEDERIIP HTGDMWKPID PRASRPKSLA HVLVSYCMGK R
101: TASGLLVLEE PDMCRLCVLN PFTGTLFRFR VPPVHPFDRS VVVAGSSPMV LFSFYNFHHL AWADQNCVFF PPLVKPTPAL RGFTAVVAFQ GRVYAAHSSG
201: SVALVELSRR HNKPQITVIV PSSNWQATPT LLVDNAGELL LLRIPVYSRM EVFRVDLVRK TLVPVNSIGN RALFLGLRCS LSVDADRLPA VDANFIYYGE
301: GLMCEAGVCA HRLGDDRSFI ERWEDERIIP HTGDMWKPID PRASRPKSLA HVLVSYCMGK R
001: MADWSLLPND LLELIVGHLE TSFEIVLFRS VCRSWRSVVP PLDHSRCLGI KTHDISFNAG FTFSDQPTDQ PPFKSSVDCT LKNIPIYLVK FWTPYGDDYL
101: IAEMREREGG EPKLLLSPLS SNRIIYGMGI NKVLFNSLTS PIIPFGQYYE ITYFKKQPIR YRYGLPYHLW NEVEWVETSE RVEFLRLHSE DSRDFAVLFA
201: GRMCNLVMYR SRNMSWTQVV EHPETYAYQD LVAFKGKFYA LDSSGRGRVF VVELSLRVTE IPSVKGSQYC SKESLVQLGE ELLLVQRFIP AGRRYDEYIY
301: TWFKVFRLDE EGGKRKWVQV NYLNDRVIFL GARTKLCCSV HKLPGANENC IVFLASNDGS IFDNDSVLLF DLKTRRTNTA FNECKGYMGV FGANLKSLVS
401: CGLVTIPNPT TRFLL
101: IAEMREREGG EPKLLLSPLS SNRIIYGMGI NKVLFNSLTS PIIPFGQYYE ITYFKKQPIR YRYGLPYHLW NEVEWVETSE RVEFLRLHSE DSRDFAVLFA
201: GRMCNLVMYR SRNMSWTQVV EHPETYAYQD LVAFKGKFYA LDSSGRGRVF VVELSLRVTE IPSVKGSQYC SKESLVQLGE ELLLVQRFIP AGRRYDEYIY
301: TWFKVFRLDE EGGKRKWVQV NYLNDRVIFL GARTKLCCSV HKLPGANENC IVFLASNDGS IFDNDSVLLF DLKTRRTNTA FNECKGYMGV FGANLKSLVS
401: CGLVTIPNPT TRFLL
Arabidopsis Description
Putative F-box protein At2g16290 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIX0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.