Factsheet for TraesCS3A01G464100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 1
plasma membrane 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid, secretory
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G458400.1	Wheat	cytosol	44.77	46.35
TraesCS2D01G343100.1	Wheat	cytosol	42.82	43.46
TraesCS2B01G363100.1	Wheat	cytosol, peroxisome, plastid	37.23	43.34
TraesCS3B01G507700.1	Wheat	endoplasmic reticulum, golgi	44.77	42.89
TraesCS3D01G458300.1	Wheat	cytosol	42.82	42.82
TraesCS3A01G464700.1	Wheat	cytosol	42.09	42.72
TraesCS3A01G467500.1	Wheat	cytosol	36.25	41.85
TraesCS3A01G464300.1	Wheat	cytosol	39.66	40.75
TraesCS3A01G464200.1	Wheat	cytosol	36.74	38.13
TraesCS3A01G463900.1	Wheat	plastid	38.44	37.98
TraesCS3A01G463800.1	Wheat	extracellular, vacuole	20.92	35.1
Zm00001d021115_P001	Maize	cytosol	25.79	35.1
TraesCS6A01G141000.1	Wheat	cytosol	27.49	34.24
Zm00001d021117_P001	Maize	cytosol, plastid	27.25	33.53
Zm00001d021099_P001	Maize	cytosol, vacuole	26.52	32.63
TraesCS1A01G095900.1	Wheat	cytosol, plasma membrane, plastid	24.33	31.15
Zm00001d021107_P001	Maize	cytosol	27.49	31.04
Zm00001d021097_P001	Maize	cytosol	27.74	30.4
TraesCS3A01G497100.1	Wheat	cytosol	31.14	29.77
Zm00001d021103_P001	Maize	cytosol	20.44	27.54
TraesCS5A01G442900.1	Wheat	cytosol	29.68	26.75
EES02090	Sorghum	cytosol	25.79	25.6
TraesCS5A01G350400.1	Wheat	cytosol	19.71	22.44
TraesCS3A01G498000.1	Wheat	cytosol	18.73	19.59
TraesCS3A01G497300.1	Wheat	cytosol	16.79	17.21
TraesCS3A01G497400.1	Wheat	peroxisome	16.3	17.05

Protein Annotations

EnsemblPlants:TraesCS3A01G464100.1	EnsemblPlantsGene:TraesCS3A01G464100	InterPro:DUF295	PANTHER:PTHR33165	PANTHER:PTHR33165:SF11	PFAM:PF03478
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:698350579..698353162

Molecular Weight (calculated)

45338.8 Da

IEP (calculated)

7.827

GRAVY (calculated)

0.081

Length

411 amino acids

Sequence
(BLAST)

001: MAAAPREVPT PLASAILLLP AKRVKQDPSC PEPSSAVPAM EAAGWSTLSG DLIRRIADSF LANNDLDYYM SVRGVCPTWR AATDDPTSHT GDSRFHSRGW
101: IVLDEDFQGD GRRVLLNTLT GRFFRKKLPL LLDYYIIGTS QGFFVLADRS PPHAPRVFNP LTSCMVRFAA PVPCEVGLSE VDSSLALALF CDSSRTIYKA
201: ARDSEHFVAV KTRSKKPAVY DCFRKAAVGG VYAEISGLKS TVLAETITIL PMAMRACFSA DSEFYSDLHR DVKDLQSSLV VLSGQMLLVV GAPIPFVCQV
301: DIDAARLHPL RSIDRFAIFL SNRRCLAVDT DMFPSINANC IYFIHLLGTS AYICKSNIED RKVERISENP DFVKQGKQFV LVACRPVTVI QLLSSYTINI
401: PDSQLALQQM P

Best Arabidopsis Sequence Match ( AT2G26160.1 )
(BLAST)

001: MEKPEWSELP GDLINLTANR FSSISDVLRV RSICKPWRSA AATPKSFQCN LPSSNKMIET VLSPTTFFRV TGPSSCSYKG WLIRTKQVSE SSKINLLSPF
101: FRQLLTPSQQ TLDLLKFEVS EIRQSYEIHI FDKYLIQGVI GKEGPSHILS RVVFLDNLIF AVGQDDKIWC CKSGEESSRI WTKIKNQVED FLDIILHKGQ
201: VYALDLTGAI WWISLSPLSL LQFTPSIPMD YDGYDSCNKR LVEYCGDLCI IHQLRLKKAY IRRSQRTVGF KVYKMDEYVA KWVEVRSLGD KALIVARDSC
301: FTVVASEYHG CLNNSIYFVD NVRKSVIRMK L

Arabidopsis Description

F-box protein At2g26160 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEZ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.