Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d021115_P001 | Maize | cytosol | 79.67 | 96.03 |
| Zm00001d021099_P001 | Maize | cytosol, vacuole | 75.82 | 82.63 |
| Zm00001d021103_P001 | Maize | cytosol | 60.16 | 71.8 |
| Zm00001d021097_P001 | Maize | cytosol | 63.19 | 61.33 |
| Zm00001d021117_P001 | Maize | cytosol, plastid | 55.22 | 60.18 |
| TraesCS6A01G141000.1 | Wheat | cytosol | 36.81 | 40.61 |
| TraesCS1A01G095900.1 | Wheat | cytosol, plasma membrane, plastid | 33.24 | 37.69 |
| TraesCS4D01G058600.1 | Wheat | cytosol | 39.84 | 35.98 |
| TraesCS3D01G512600.1 | Wheat | cytosol, nucleus, peroxisome | 35.71 | 35.91 |
| TraesCS1B01G127800.1 | Wheat | plasma membrane | 37.64 | 35.86 |
| TraesCS3B01G507400.1 | Wheat | cytosol | 39.01 | 35.24 |
| TraesCS4B01G058700.1 | Wheat | plastid | 42.86 | 35.21 |
| TraesCS1D01G104900.1 | Wheat | extracellular, plasma membrane, plastid | 36.81 | 35.17 |
| TraesCS1D01G365300.1 | Wheat | cytosol | 34.89 | 34.89 |
| TraesCS3D01G458200.1 | Wheat | plastid | 39.84 | 34.86 |
| TraesCS5D01G038100.1 | Wheat | cytosol | 41.76 | 34.78 |
| TraesCS3A01G463900.1 | Wheat | plastid | 39.56 | 34.62 |
| TraesCS3D01G457900.1 | Wheat | plastid | 40.11 | 34.52 |
| TraesCS3D01G458000.1 | Wheat | cytosol | 38.74 | 34.06 |
| TraesCS3D01G069100.1 | Wheat | cytosol | 34.62 | 33.78 |
| TraesCS3B01G507200.1 | Wheat | cytosol | 17.03 | 33.7 |
| TraesCS3A01G464300.1 | Wheat | cytosol | 36.81 | 33.5 |
| TraesCS3D01G458900.1 | Wheat | cytosol | 36.81 | 33.5 |
| TraesCS3B01G508400.1 | Wheat | cytosol | 32.69 | 33.24 |
| TraesCS3B01G572600.1 | Wheat | peroxisome | 29.67 | 33.13 |
| TraesCS3A01G464200.1 | Wheat | cytosol | 35.71 | 32.83 |
| TraesCS3A01G497100.1 | Wheat | cytosol | 38.74 | 32.79 |
| TraesCS3B01G507800.1 | Wheat | cytosol, plasma membrane, plastid | 35.16 | 32.57 |
| TraesCS3A01G467500.1 | Wheat | cytosol | 31.32 | 32.02 |
| TraesCS3D01G458400.1 | Wheat | cytosol | 34.89 | 31.99 |
| TraesCS3D01G458300.1 | Wheat | cytosol | 35.71 | 31.63 |
| TraesCS3D01G464100.1 | Wheat | cytosol, mitochondrion, peroxisome | 34.62 | 31.58 |
| TraesCS2D01G343100.1 | Wheat | cytosol | 34.34 | 30.86 |
| TraesCS3D01G459700.1 | Wheat | cytosol, plastid | 33.24 | 29.95 |
| TraesCS3B01G507700.1 | Wheat | endoplasmic reticulum, golgi | 34.89 | 29.6 |
| TraesCS2B01G363100.1 | Wheat | cytosol, peroxisome, plastid | 28.57 | 29.46 |
| TraesCS1B01G077100.1 | Wheat | cytosol | 34.62 | 29.44 |
| EES02090 | Sorghum | cytosol | 33.24 | 29.23 |
| TraesCS3A01G463800.1 | Wheat | extracellular, vacuole | 19.23 | 28.57 |
| TraesCS6B01G438000.1 | Wheat | cytosol, plastid | 31.87 | 28.43 |
| TraesCS3A01G464700.1 | Wheat | cytosol | 31.59 | 28.4 |
| TraesCS3A01G464100.1 | Wheat | plastid | 31.04 | 27.49 |
| TraesCS3D01G462200.1 | Wheat | cytosol | 32.69 | 26.74 |
| TraesCS3D01G459500.1 | Wheat | cytosol | 32.14 | 25.83 |
| TraesCS3D01G458800.1 | Wheat | cytosol | 12.64 | 24.47 |
| Zm00001d019067_P001 | Maize | cytosol | 30.49 | 24.18 |
| TraesCS3B01G597100.1 | Wheat | mitochondrion, plastid | 17.58 | 21.26 |
| TraesCS3B01G585500.1 | Wheat | cytosol, mitochondrion | 17.58 | 21.26 |
| TraesCS6B01G350200.1 | Wheat | cytosol | 15.38 | 15.34 |
| TraesCS6D01G298900.1 | Wheat | cytosol | 14.56 | 14.6 |
Protein Annotations
| EnsemblPlants:Zm00001d021107_P001 | EnsemblPlants:Zm00001d021107_T001 | EnsemblPlantsGene:Zm00001d021107 | InterPro:DUF295 | PANTHER:PTHR33165 | PANTHER:PTHR33165:SF11 |
| PFAM:PF03478 | ProteinID:ONM56294.1 | SEG:seg | UniParc:UPI000221C451 | UniProt:A0A1D6I8C3 | MapMan:35.2 |
Description
No Description!
Coordinates
chr7:-:142864554..142865648
Molecular Weight (calculated)
41175.1 Da
IEP (calculated)
4.999
GRAVY (calculated)
-0.094
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MASWSSLPAD LVNRIDDLLL ATDDLDCYMD LRAVCRGWRC STADPKNMSR DPRFRPRQWA MLDEVHQSDA RLFVNVATGR FVRRDLPLLR RYDVVAGAAG
101: GLVVLAERTA PYTARILNPF TGAMISFDAP MPCLYDPAAH VIGSLPTLVF ISKDDSPTFY WADPDSKSFT EDNDGQFTHP LVRLPFEFSV YAAAREGGPL
201: ESFSVLEGPI PKYLTGNAEW PYLNKRCFQV ESAEEMLVVV FQRLHGVDVF KINTRSCLLE RVKNLGSRAI FVGERRCLAV DADKFASVEA NCIYYVTDEP
301: WYDVCVYRLK DETGVRAGGA IDSFSSSFLC HDPPFSDVQL LCYYTFEVRK MFPQLQLNCF FSQT
101: GLVVLAERTA PYTARILNPF TGAMISFDAP MPCLYDPAAH VIGSLPTLVF ISKDDSPTFY WADPDSKSFT EDNDGQFTHP LVRLPFEFSV YAAAREGGPL
201: ESFSVLEGPI PKYLTGNAEW PYLNKRCFQV ESAEEMLVVV FQRLHGVDVF KINTRSCLLE RVKNLGSRAI FVGERRCLAV DADKFASVEA NCIYYVTDEP
301: WYDVCVYRLK DETGVRAGGA IDSFSSSFLC HDPPFSDVQL LCYYTFEVRK MFPQLQLNCF FSQT
001: MADWSTLPVD LLNMIAGRLF SNIELKRFRS ICRSWRSSVP GAGKKNPFRT RPLILLNPNP NKPLTDHRRR GEFLSRSAFF RVTLSSSPSQ GWLIKSDVDV
101: SSGKLHLLDP LSRLPMEHSR KRVDLSEFTI TEIREAYQVH DWRTRKETRP IFKRVALVKD KEGDNQVLGI RSTGKMMYWD IKTWKAKEEG YEFSDIIVHK
201: GQTYALDSIG IVYWIRSDLK FIRFGPLVGD WTGDRRLVEC CGEFYIVERL VGESTWKRKA DDTGYEYAKT VGFKVYKFDD EQGKMMEVKS LGDKAFVIAT
301: DTCFSVLAHE FYGCLENAIY FTDDTMIKVF KLDNGNGSSI ETTIYPYAQS CFQMFVPSFL
101: SSGKLHLLDP LSRLPMEHSR KRVDLSEFTI TEIREAYQVH DWRTRKETRP IFKRVALVKD KEGDNQVLGI RSTGKMMYWD IKTWKAKEEG YEFSDIIVHK
201: GQTYALDSIG IVYWIRSDLK FIRFGPLVGD WTGDRRLVEC CGEFYIVERL VGESTWKRKA DDTGYEYAKT VGFKVYKFDD EQGKMMEVKS LGDKAFVIAT
301: DTCFSVLAHE FYGCLENAIY FTDDTMIKVF KLDNGNGSSI ETTIYPYAQS CFQMFVPSFL
Arabidopsis Description
AMR1Putative F-box protein At1g65770 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHX9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.