Factsheet for TraesCS1D01G365300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G497100.1	Wheat	cytosol	58.52	49.53
TraesCS5D01G038100.1	Wheat	cytosol	57.97	48.28
Zm00001d021115_P001	Maize	cytosol	32.42	39.07
TraesCS4D01G058600.1	Wheat	cytosol	40.93	36.97
Zm00001d021099_P001	Maize	cytosol, vacuole	33.24	36.23
TraesCS3D01G464100.1	Wheat	cytosol, mitochondrion, peroxisome	39.56	36.09
Zm00001d021117_P001	Maize	cytosol, plastid	32.97	35.93
Zm00001d021097_P001	Maize	cytosol	36.81	35.73
Zm00001d021107_P001	Maize	cytosol	34.89	34.89
TraesCS3D01G069100.1	Wheat	cytosol	35.71	34.85
TraesCS3D01G458900.1	Wheat	cytosol	37.64	34.25
TraesCS1D01G104900.1	Wheat	extracellular, plasma membrane, plastid	34.89	33.33
TraesCS3D01G459700.1	Wheat	cytosol, plastid	36.54	32.92
TraesCS3D01G458000.1	Wheat	cytosol	37.36	32.85
TraesCS3D01G458400.1	Wheat	cytosol	35.71	32.75
TraesCS2D01G343100.1	Wheat	cytosol	35.71	32.1
Zm00001d021103_P001	Maize	cytosol	26.65	31.8
TraesCS3D01G512600.1	Wheat	cytosol, nucleus, peroxisome	31.59	31.77
TraesCS3D01G457900.1	Wheat	plastid	36.81	31.68
TraesCS3D01G458300.1	Wheat	cytosol	35.44	31.39
TraesCS3D01G458200.1	Wheat	plastid	35.44	31.01
TraesCS3D01G462200.1	Wheat	cytosol	36.26	29.66
TraesCS3D01G459500.1	Wheat	cytosol	35.16	28.26
TraesCS1D01G092000.1	Wheat	cytosol	27.2	27.89
EES02090	Sorghum	cytosol	29.95	26.33
TraesCS3D01G458800.1	Wheat	cytosol	13.19	25.53
TraesCS3D01G504700.1	Wheat	cytosol	24.18	23.98
TraesCS3D01G504800.1	Wheat	cytosol	24.45	21.87
TraesCS6D01G389700.1	Wheat	mitochondrion	24.18	20.14
TraesCS5D01G357400.1	Wheat	plastid	17.86	18.06
TraesCS7D01G325400.1	Wheat	cytosol, mitochondrion	17.03	17.03
TraesCS3D01G494300.1	Wheat	cytosol	21.43	16.53
TraesCS6D01G298900.1	Wheat	cytosol	14.29	14.33

Protein Annotations

EnsemblPlants:TraesCS1D01G365300.1	EnsemblPlantsGene:TraesCS1D01G365300	InterPro:DUF295	PANTHER:PTHR33165	PANTHER:PTHR33165:SF11	PFAM:PF03478
SEG:seg	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:445996528..445998319

Molecular Weight (calculated)

40351.4 Da

IEP (calculated)

5.638

GRAVY (calculated)

0.057

Length

364 amino acids

Sequence
(BLAST)

001: MADWPSLPPE LIRRIADCIL DTNDLDCYVD FRAVCPTWRS ATDDPKNSSE LRFRPHRWII IDEVFESHSR LLVNTVSGLV VRKDLPLLGS YFVVATTHGG
101: FFVLGKKEPP HAAVVLNPFT GHMIRFKASP NYVGVCAAAL SGLFMGKLPT SSDLSELRSS PTLILLSDRC YREYFMAVPD SVRFSIDAED VKLYALLRLA
201: AGGGICATDS WQRTAALLPV GLADKIFSLM KLVTDSNELE PVKSIGDRAI FIGHRMCVSV NTHKFPSIVP NCIYYACSSD SSLDIYQYDL PTDNAERVSE
301: GIGSLINSGM SFANPPFTII QLLSSYTINA RASQLAMEKI KPQPQAAATP YLDYWSDSDL DIFW

Best Arabidopsis Sequence Match ( AT2G17690.1 )
(BLAST)

001: MGDWSKLPEE LLGLIALRLY SVIELIRFRS ICKSWRSSAS GVNKNHSLSS PLIYFKPLQI ILARAQANGQ ILSKYHGTVL SRATFFRVTL ASSPDQGWLI
101: KSDTDLKYRN FHLLNCLSRK ALGRSRKLIS LSEFIVSEIQ ESYAVVGRRT RETASEFKRV FLVRVQGGDH RVLVIGIDGK IRFWKGGIWN GIKKQVAQFS
201: DFVLDEGLTY AVDTKGIMWW ISSAYDIIRY GTKLHENITN GSCGEKRFVR CRGELYIVDR LIDENLLKRK ADSYDDNAIV HFRNADYTNA DLWEDGNGND
301: DFFAAQAHRF IHVLHDNLGN VSCKPFERDP PKTIGFKVYK NDEELLKWVE VKSLGDKAIV IATDACFSVS AHEFYGCLPN SIYFTDKKEE EVKVFKLDDG
401: SITTMSESEQ SCFQMFVPSF L

Arabidopsis Description

SDCF-box protein At2g17690 [Source:UniProtKB/Swiss-Prot;Acc:Q3EBY8]
SUBAcon: [cytosol,nucleus,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.