Factsheet for TraesCS3D01G464100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, peroxisome, mitochondrion

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G462200.1	Wheat	cytosol	79.2	71.01
TraesCS3A01G467500.1	Wheat	cytosol	59.4	66.57
TraesCS3D01G459700.1	Wheat	cytosol, plastid	59.4	58.66
TraesCS3D01G459500.1	Wheat	cytosol	57.14	50.33
TraesCS3D01G458300.1	Wheat	cytosol	48.12	46.72
TraesCS3D01G458400.1	Wheat	cytosol	45.86	46.1
TraesCS3D01G458900.1	Wheat	cytosol	45.61	45.5
TraesCS3D01G458000.1	Wheat	cytosol	45.86	44.2
TraesCS3D01G458200.1	Wheat	plastid	44.86	43.03
TraesCS2D01G343100.1	Wheat	cytosol	42.86	42.22
Zm00001d021115_P001	Maize	cytosol	31.58	41.72
TraesCS3D01G457900.1	Wheat	plastid	43.86	41.37
TraesCS1D01G365300.1	Wheat	cytosol	36.09	39.56
TraesCS3D01G458800.1	Wheat	cytosol	18.3	38.83
TraesCS3D01G069100.1	Wheat	cytosol	36.09	38.61
Zm00001d021117_P001	Maize	cytosol, plastid	31.58	37.72
Zm00001d021099_P001	Maize	cytosol, vacuole	30.83	36.83
TraesCS4D01G058600.1	Wheat	cytosol	36.59	36.23
Zm00001d021097_P001	Maize	cytosol	33.08	35.2
TraesCS5D01G038100.1	Wheat	cytosol	38.35	35.01
Zm00001d021107_P001	Maize	cytosol	31.58	34.62
TraesCS3D01G512600.1	Wheat	cytosol, nucleus, peroxisome	31.08	34.25
TraesCS1D01G104900.1	Wheat	extracellular, plasma membrane, plastid	31.58	33.07
TraesCS1D01G092000.1	Wheat	cytosol	28.07	31.55
Zm00001d021103_P001	Maize	cytosol	22.56	29.51
EES02090	Sorghum	cytosol	28.82	27.78
TraesCS3D01G504700.1	Wheat	cytosol	24.31	26.43
TraesCS3D01G504800.1	Wheat	cytosol	23.81	23.34
TraesCS6D01G389700.1	Wheat	mitochondrion	23.81	21.74
TraesCS5D01G357400.1	Wheat	plastid	16.29	18.06
TraesCS3D01G494300.1	Wheat	cytosol	19.55	16.53
TraesCS7D01G325400.1	Wheat	cytosol, mitochondrion	14.79	16.21
TraesCS6D01G298900.1	Wheat	cytosol	14.29	15.7

Protein Annotations

EnsemblPlants:TraesCS3D01G464100.1	EnsemblPlantsGene:TraesCS3D01G464100	Gene3D:1.20.1280.50	InterPro:DUF295	PANTHER:PTHR33165	PANTHER:PTHR33165:SF11
PFAM:PF03478	SEG:seg	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr3D:+:568008899..568010683

Molecular Weight (calculated)

44932.9 Da

IEP (calculated)

7.418

GRAVY (calculated)

-0.028

Length

399 amino acids

Sequence
(BLAST)

001: MAAAPAQVLP PAKRWKKDPN FLETSPVHPA NAVTADWPSL PPDIVRHIAD SFLATNDLDW YVDLRAVCHN WRSATDDPKD STSDPRFLLR RWIILDEVFQ
101: SDMRRLLVNT ATGRFLHKEL HALRHYHVVA TTLCGLFVLA DRSPPHAARV FNPLTGDIIR FAVPVPPEVQ VTAAVCFDFS SPLLSLFFDS CCKMHIASPH
201: SSDAQVYDFD PSVYSFFRRA VGGGLVGRWW EFAGTTDLAL KICKVGQSLG VNLSKFFSGA RCLPMEFVGQ MLIIIKGQQF FHVLRFKTES AELLHVETIC
301: NHAIFIGRHR CLAVDAHMFP SIEANCIYYT EHQGSSAHIW KYNIKDRKAD RISEAVDFVK QDKQFVLIGD RPSTIIQLLS SYTISTRDSE MAGAVKLDD

Best Arabidopsis Sequence Match ( AT4G35733.1 )
(BLAST)

001: MSEATVWSDL PGELLDHIAN GLFSKVELLR FRSICKTFRS AVDSDKNFLD HLKRNRRRLL SPYSTGKTCS LSPAAFYRVV LSSYPDKGWL IKLQDAYVSS
101: QKQLLSPLSR FSIKSSGKTL DLLEFTVSEI HQSYDVEYLY YNSTRASFNF ARVVLAEDFV FIVDNYKKIW LCNSNESDSH WVRIMDEEVK LFSDIVFHKG
201: YMYALDLTGA VWWISLSEFG IFQFGPSSTP MDYCDIDECK DKRFVEYCGD LCIVHRFSRK FRIKRVDIDM TVGFKVYKMD EELVEYVEVK SLGDKAFVMA
301: TDSCFSVLAR EYYGCLENSI YFTEQNNVKV FKLGDGSITN MVDSSFQSCF QMLIPPLV

Arabidopsis Description

F-box protein At4g35733 [Source:UniProtKB/Swiss-Prot;Acc:B3H6C3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.