Factsheet for TraesCS1D01G092000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G110300.1	Wheat	cytosol	88.17	88.17
TraesCS3D01G069100.1	Wheat	cytosol	32.96	31.37
TraesCS3D01G512600.1	Wheat	cytosol, nucleus, peroxisome	28.73	28.18
TraesCS3D01G464100.1	Wheat	cytosol, mitochondrion, peroxisome	31.55	28.07
TraesCS3D01G458200.1	Wheat	plastid	32.68	27.88
TraesCS4D01G058600.1	Wheat	cytosol	31.55	27.79
TraesCS3D01G458400.1	Wheat	cytosol	30.99	27.71
TraesCS1D01G365300.1	Wheat	cytosol	27.89	27.2
TraesCS3D01G458000.1	Wheat	cytosol	31.55	27.05
TraesCS3D01G459700.1	Wheat	cytosol, plastid	30.42	26.73
TraesCS1D01G104900.1	Wheat	extracellular, plasma membrane, plastid	27.89	25.98
TraesCS5D01G038100.1	Wheat	cytosol	31.55	25.63
TraesCS3D01G458300.1	Wheat	cytosol	29.3	25.3
TraesCS3D01G457900.1	Wheat	plastid	30.14	25.3
TraesCS3D01G458900.1	Wheat	cytosol	28.17	25.0
TraesCS2D01G343100.1	Wheat	cytosol	28.45	24.94
TraesCS3D01G459500.1	Wheat	cytosol	30.42	23.84
TraesCS3D01G504700.1	Wheat	cytosol	23.1	22.34
TraesCS3D01G462200.1	Wheat	cytosol	27.04	21.57
TraesCS3D01G504800.1	Wheat	cytosol	22.82	19.9
TraesCS5D01G357400.1	Wheat	plastid	19.44	19.17
TraesCS3D01G458800.1	Wheat	cytosol	9.86	18.62
TraesCS6D01G389700.1	Wheat	mitochondrion	22.82	18.54
TraesCS7D01G325400.1	Wheat	cytosol, mitochondrion	15.77	15.38
TraesCS6D01G298900.1	Wheat	cytosol	15.49	15.15
TraesCS3D01G494300.1	Wheat	cytosol	19.72	14.83

Protein Annotations

EnsemblPlants:TraesCS1D01G092000.1	EnsemblPlantsGene:TraesCS1D01G092000	InterPro:DUF295	PANTHER:PTHR33165	PANTHER:PTHR33165:SF11	PFAM:PF03478
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:78921463..78922530

Molecular Weight (calculated)

40298.2 Da

IEP (calculated)

5.626

GRAVY (calculated)

-0.220

Length

355 amino acids

Sequence
(BLAST)

001: MASSLPADVV RRLGDLFLDT DDVDYYMTMR GVCHGWRVST DDPKTSPADP RFRLGRWVML DERRPKSDED ERASGRLFLN TTTGRRVYKR LPRLDDYYFV
101: TSTGGLIVLA SRTAPHMVCV MNLFTDSCIS FAAPIPNSVR NTTAYLREVD HFPTLVLDDG PLPDTAYTAK LDAEQFAVEE YNLVDKVRTI WGIDAADQEM
201: IGGLMRSITA VLPYKMYFLY TCYHILESAG DMLIVIHRQH PRHGVDVFKV NVEEKAVEPV RSIGSRALFL GQRCVSVDTN KFSTIEGNRV FYFGGGEQYD
301: KGIGIYMFDL TNETEKWITS DVHDFSLGFG EHTKPTMIQT LMKYCIDTPW VPTGV

Best Arabidopsis Sequence Match ( AT5G60060.1 )
(BLAST)

001: MDSSSLLPSQ WSDLPLDILE LISDRLDHDS SDTIHLLCLR SVCATWRLSL PLSNKNNRLS KFPKYLPFWS SSSSSSGFFT LKQSNVYKLE APLNPRTCLV
101: KLQETTPGIM RVLDLFSNDR ICFLPENFPS KIDLQEFHVR LVRRTYRMEY ANNGGGAVPC FWSLHSDKVV ILSSGEDSAI IAIHSGGKLG FLKSGNDEKW
201: KILDNSWNVI YEDIMLYKDN RCIVVDDKGK TVIYDVDFKV SDLAEGLVGG GGHKKHLVEC SGGEVFLVDK YVKTVWCKSD ISKSVVEFRV YNLKREEKRW
301: EEVRDLGDVA LFIGDDCSFS VQNPAGDLAG GFIFYSDYRN GGRSRGICSD GDGVFNVDMQ GDFVFSIKPN YFGP

Arabidopsis Description

Putative F-box protein At5g60060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVG8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.