Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G507400.1 | Wheat | cytosol | 91.83 | 94.79 |
| TraesCS3A01G463900.1 | Wheat | plastid | 94.71 | 94.71 |
| TraesCS3D01G458000.1 | Wheat | cytosol | 68.03 | 68.36 |
| TraesCS3D01G457900.1 | Wheat | plastid | 56.01 | 55.08 |
| TraesCS3D01G458400.1 | Wheat | cytosol | 45.43 | 47.61 |
| TraesCS3D01G459700.1 | Wheat | cytosol, plastid | 45.43 | 46.78 |
| Zm00001d021115_P001 | Maize | cytosol | 33.17 | 45.7 |
| TraesCS3D01G458900.1 | Wheat | cytosol | 43.51 | 45.25 |
| TraesCS3D01G464100.1 | Wheat | cytosol, mitochondrion, peroxisome | 43.03 | 44.86 |
| TraesCS2D01G343100.1 | Wheat | cytosol | 41.59 | 42.72 |
| TraesCS3D01G458300.1 | Wheat | cytosol | 42.07 | 42.58 |
| Zm00001d021099_P001 | Maize | cytosol, vacuole | 33.65 | 41.92 |
| Zm00001d021117_P001 | Maize | cytosol, plastid | 32.45 | 40.42 |
| TraesCS3D01G459500.1 | Wheat | cytosol | 43.99 | 40.4 |
| Zm00001d021107_P001 | Maize | cytosol | 34.86 | 39.84 |
| TraesCS4D01G058600.1 | Wheat | cytosol | 37.74 | 38.96 |
| Zm00001d021097_P001 | Maize | cytosol | 35.1 | 38.93 |
| TraesCS3D01G069100.1 | Wheat | cytosol | 34.86 | 38.87 |
| TraesCS3D01G458800.1 | Wheat | cytosol | 17.55 | 38.83 |
| TraesCS3D01G462200.1 | Wheat | cytosol | 41.35 | 38.65 |
| TraesCS5D01G038100.1 | Wheat | cytosol | 40.14 | 38.22 |
| TraesCS1D01G104900.1 | Wheat | extracellular, plasma membrane, plastid | 32.93 | 35.96 |
| TraesCS3D01G512600.1 | Wheat | cytosol, nucleus, peroxisome | 31.01 | 35.64 |
| TraesCS1D01G365300.1 | Wheat | cytosol | 31.01 | 35.44 |
| Zm00001d021103_P001 | Maize | cytosol | 24.52 | 33.44 |
| TraesCS1D01G092000.1 | Wheat | cytosol | 27.88 | 32.68 |
| EES02090 | Sorghum | cytosol | 28.12 | 28.26 |
| TraesCS3D01G504700.1 | Wheat | cytosol | 23.56 | 26.7 |
| TraesCS3D01G504800.1 | Wheat | cytosol | 23.56 | 24.08 |
| TraesCS5D01G357400.1 | Wheat | plastid | 18.75 | 21.67 |
| TraesCS6D01G389700.1 | Wheat | mitochondrion | 21.39 | 20.37 |
| TraesCS3D01G494300.1 | Wheat | cytosol | 19.47 | 17.16 |
| TraesCS7D01G325400.1 | Wheat | cytosol, mitochondrion | 14.9 | 17.03 |
| TraesCS6D01G298900.1 | Wheat | cytosol | 13.7 | 15.7 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G458200.1 | EnsemblPlantsGene:TraesCS3D01G458200 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:DUF295 |
| InterPro:F-box_dom | InterPro:IPR001810 | PANTHER:PTHR33165 | PANTHER:PTHR33165:SF11 | PFAM:PF00646 | PFAM:PF03478 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:563594971..563596296
Molecular Weight (calculated)
45675.0 Da
IEP (calculated)
7.110
GRAVY (calculated)
0.086
Length
416 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPAAEAPA PVAAPVLPPA RSKDADPARL QTSPLLPAAG WSDLPPDLVR RVADSLVAAN DLDCYMDFRA VCSGWRAATD DPRSDPFDPR FRPRRWVILD
101: DGDDLLLLNA ATGRFLRKRI PLLRRYHVLA ATPGGFFVLA DRYPSRAACV FNPLTGVLIR FAAPVPTKKV AAATVVFGRS SWPTLTLNLL CDSPSKSYSA
201: TPDMASFQEK EVQLPIDCHI SLKAVRGGVY ADGGGAAQGY RHGVSVIFEI FDLIQSLHVH PSMFYAEDLP VAGHANDHTR FFIVEFGGEV LIIIKLQRCV
301: KVFKMDIGSI VPVESIGSHA IFIGHHRCLA VDTDKFPSVE SNCLYYVERL GSSAYICMYN LKDEKDERIS AGAVDFVKLH ELFVLAAHRP FTIIQLLSSY
401: TINVWDSQLP LQQGAN
101: DGDDLLLLNA ATGRFLRKRI PLLRRYHVLA ATPGGFFVLA DRYPSRAACV FNPLTGVLIR FAAPVPTKKV AAATVVFGRS SWPTLTLNLL CDSPSKSYSA
201: TPDMASFQEK EVQLPIDCHI SLKAVRGGVY ADGGGAAQGY RHGVSVIFEI FDLIQSLHVH PSMFYAEDLP VAGHANDHTR FFIVEFGGEV LIIIKLQRCV
301: KVFKMDIGSI VPVESIGSHA IFIGHHRCLA VDTDKFPSVE SNCLYYVERL GSSAYICMYN LKDEKDERIS AGAVDFVKLH ELFVLAAHRP FTIIQLLSSY
401: TINVWDSQLP LQQGAN
001: MSEATVWSDL PGELLDHIAN GLFSKVELLR FRSICKTFRS AVDSDKNFLD HLKRNRRRLL SPYSTGKTCS LSPAAFYRVV LSSYPDKGWL IKLQDAYVSS
101: QKQLLSPLSR FSIKSSGKTL DLLEFTVSEI HQSYDVEYLY YNSTRASFNF ARVVLAEDFV FIVDNYKKIW LCNSNESDSH WVRIMDEEVK LFSDIVFHKG
201: YMYALDLTGA VWWISLSEFG IFQFGPSSTP MDYCDIDECK DKRFVEYCGD LCIVHRFSRK FRIKRVDIDM TVGFKVYKMD EELVEYVEVK SLGDKAFVMA
301: TDSCFSVLAR EYYGCLENSI YFTEQNNVKV FKLGDGSITN MVDSSFQSCF QMLIPPLV
101: QKQLLSPLSR FSIKSSGKTL DLLEFTVSEI HQSYDVEYLY YNSTRASFNF ARVVLAEDFV FIVDNYKKIW LCNSNESDSH WVRIMDEEVK LFSDIVFHKG
201: YMYALDLTGA VWWISLSEFG IFQFGPSSTP MDYCDIDECK DKRFVEYCGD LCIVHRFSRK FRIKRVDIDM TVGFKVYKMD EELVEYVEVK SLGDKAFVMA
301: TDSCFSVLAR EYYGCLENSI YFTEQNNVKV FKLGDGSITN MVDSSFQSCF QMLIPPLV
Arabidopsis Description
F-box protein At4g35733 [Source:UniProtKB/Swiss-Prot;Acc:B3H6C3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.