Factsheet for TraesCS3D01G504700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G560000.1	Wheat	cytosol	93.46	85.11
TraesCS3D01G504800.1	Wheat	cytosol	92.37	83.29
TraesCS3B01G559900.1	Wheat	cytosol	91.55	83.17
TraesCS6D01G389700.1	Wheat	mitochondrion	32.15	27.0
TraesCS3D01G069100.1	Wheat	cytosol	26.16	25.74
TraesCS3D01G512600.1	Wheat	cytosol, nucleus, peroxisome	24.8	25.14
TraesCS3D01G457900.1	Wheat	plastid	28.07	24.35
TraesCS3D01G464100.1	Wheat	cytosol, mitochondrion, peroxisome	26.43	24.31
TraesCS1D01G365300.1	Wheat	cytosol	23.98	24.18
TraesCS3D01G458000.1	Wheat	cytosol	27.25	24.15
TraesCS4D01G058600.1	Wheat	cytosol	26.43	24.07
TraesCS3D01G458900.1	Wheat	cytosol	26.16	24.0
TraesCS3D01G458200.1	Wheat	plastid	26.7	23.56
TraesCS3D01G459700.1	Wheat	cytosol, plastid	25.89	23.51
TraesCS3D01G458400.1	Wheat	cytosol	25.07	23.17
TraesCS1D01G092000.1	Wheat	cytosol	22.34	23.1
TraesCS5D01G038100.1	Wheat	cytosol	26.43	22.2
TraesCS3D01G458300.1	Wheat	cytosol	24.8	22.14
TraesCS1D01G104900.1	Wheat	extracellular, plasma membrane, plastid	22.89	22.05
TraesCS3D01G459500.1	Wheat	cytosol	25.61	20.75
TraesCS2D01G343100.1	Wheat	cytosol	22.89	20.74
TraesCS3D01G458800.1	Wheat	cytosol	10.08	19.68
TraesCS3D01G462200.1	Wheat	cytosol	23.71	19.55
TraesCS5D01G357400.1	Wheat	plastid	17.98	18.33
TraesCS6D01G298900.1	Wheat	cytosol	14.99	15.15
TraesCS7D01G325400.1	Wheat	cytosol, mitochondrion	14.71	14.84
TraesCS3D01G494300.1	Wheat	cytosol	16.08	12.5

Protein Annotations

EnsemblPlants:TraesCS3D01G504700.1

EnsemblPlantsGene:TraesCS3D01G504700

PANTHER:PTHR33165

PANTHER:PTHR33165:SF11

SEG:seg

MapMan:35.2

Description

No Description!

Coordinates

chr3D:-:592240939..592242510

Molecular Weight (calculated)

41527.3 Da

IEP (calculated)

6.318

GRAVY (calculated)

-0.256

Length

367 amino acids

Sequence
(BLAST)

001: MADLVFWKNL PYDITRKISE SFLATDDIDH YVAFRAVCAN WRRTTDSTAD ATDPKFMPSK WIMLEHSIHD NDRVAFFNLS TGRLLRKKIP TEVRSRRYFF
101: VSVTKGGLFV LGQRAQPYQT RVLNPFTGAM ARFKVPIPME QVSSVVVTTS PMMVFISDLL NNCVSWADQT SEEWHPALGF GEGEFRTGDW GFGNRHKNLT
201: SFAGGMYITN KYGSIISTIA DVYKEEGELL LVMDGRVCNG MPVVHKVDTV NKVLVPVRSI GSHALFVSSR RCLSIDTTKS NKFHSIESGT IYYADRSVVR
301: AYDQGSLAGS GWEEEPKYVF ESATNPFSKM AELLVNYCTT IEYSELQMLP PYGEEGYTYY EYGDPSD

Best Arabidopsis Sequence Match ( AT5G60060.1 )
(BLAST)

001: MDSSSLLPSQ WSDLPLDILE LISDRLDHDS SDTIHLLCLR SVCATWRLSL PLSNKNNRLS KFPKYLPFWS SSSSSSGFFT LKQSNVYKLE APLNPRTCLV
101: KLQETTPGIM RVLDLFSNDR ICFLPENFPS KIDLQEFHVR LVRRTYRMEY ANNGGGAVPC FWSLHSDKVV ILSSGEDSAI IAIHSGGKLG FLKSGNDEKW
201: KILDNSWNVI YEDIMLYKDN RCIVVDDKGK TVIYDVDFKV SDLAEGLVGG GGHKKHLVEC SGGEVFLVDK YVKTVWCKSD ISKSVVEFRV YNLKREEKRW
301: EEVRDLGDVA LFIGDDCSFS VQNPAGDLAG GFIFYSDYRN GGRSRGICSD GDGVFNVDMQ GDFVFSIKPN YFGP

Arabidopsis Description

Putative F-box protein At5g60060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVG8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.