Factsheet for TraesCS3B01G559900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G560000.1	Wheat	cytosol	92.08	92.31
TraesCS3D01G504700.1	Wheat	cytosol	83.17	91.55
TraesCS3D01G504800.1	Wheat	cytosol	89.6	88.94
TraesCS6B01G450800.1	Wheat	mitochondrion	32.67	30.21
TraesCS1B01G110300.1	Wheat	cytosol	22.28	25.35
TraesCS3B01G507400.1	Wheat	cytosol	25.0	25.06
TraesCS3B01G507800.1	Wheat	cytosol, plasma membrane, plastid	23.76	24.43
TraesCS3B01G508400.1	Wheat	cytosol	21.53	24.3
TraesCS4B01G058700.1	Wheat	plastid	26.49	24.15
TraesCS1B01G127800.1	Wheat	plasma membrane	22.52	23.82
TraesCS3B01G507200.1	Wheat	cytosol	10.64	23.37
TraesCS3B01G572600.1	Wheat	peroxisome	17.82	22.09
TraesCS6B01G438000.1	Wheat	cytosol, plastid	22.28	22.06
TraesCS3B01G507700.1	Wheat	endoplasmic reticulum, golgi	22.77	21.45
TraesCS5B01G447400.1	Wheat	cytosol, plastid	23.76	21.29
TraesCS1B01G077100.1	Wheat	cytosol	22.52	21.26
TraesCS2B01G363100.1	Wheat	cytosol, peroxisome, plastid	18.56	21.25
TraesCS3B01G585500.1	Wheat	cytosol, mitochondrion	13.61	18.27
TraesCS3B01G597100.1	Wheat	mitochondrion, plastid	13.12	17.61
TraesCS3B01G560200.1	Wheat	cytosol	15.84	16.37
TraesCS3B01G536000.1	Wheat	cytosol	15.1	15.97
TraesCS6B01G350200.1	Wheat	cytosol	14.36	15.89
TraesCS3B01G560700.1	Wheat	cytosol	15.35	15.78
TraesCS3B01G553300.1	Wheat	cytosol	13.86	15.05
TraesCS3B01G562600.1	Wheat	peroxisome	13.86	14.18

Protein Annotations

EnsemblPlants:TraesCS3B01G559900.1

EnsemblPlantsGene:TraesCS3B01G559900

PANTHER:PTHR33165

PANTHER:PTHR33165:SF11

SEG:seg

MapMan:35.2

Description

No Description!

Coordinates

chr3B:-:793611456..793613407

Molecular Weight (calculated)

45659.0 Da

IEP (calculated)

6.320

GRAVY (calculated)

-0.290

Length

404 amino acids

Sequence
(BLAST)

001: MADLVFWKNL PYDITRKISE SFLATDDIDH YVAFRAVCGN WRRATDSTAD ATDPRFMPSK WIMLEHSIHD NDRVTFFNLS TGRRLRKKIP TEVRNRRYFF
101: VGVTKGGLFV LGQRAQPYQT RVLNPFTGAM ARFKVHIPME QVSSVVVTTS PMMVFISNLL NDCVSWADQT SEEWHPAFGF GEGECRTGDW GFGDGHKNLT
201: SFAGSMYITN KYGSIISTIT DVYKEGNQWK RSAGTISMFT AIVGPNFELA HGSNNNFYLV ESEGELLLVM DGRVCNGMPV VYKVDTVNKV LVPVRSIGSR
301: ALFVSSRRCL SIDTTKSNKF HSIESGTIYY ADRSVVRAYD QGSLAGSGWE EEPKYVFESA TNPFSKMAEL LVNYCTTIEY SELQMLPPYG EEGYTYYEYG
401: DPSD

Best Arabidopsis Sequence Match ( AT2G26160.1 )
(BLAST)

001: MEKPEWSELP GDLINLTANR FSSISDVLRV RSICKPWRSA AATPKSFQCN LPSSNKMIET VLSPTTFFRV TGPSSCSYKG WLIRTKQVSE SSKINLLSPF
101: FRQLLTPSQQ TLDLLKFEVS EIRQSYEIHI FDKYLIQGVI GKEGPSHILS RVVFLDNLIF AVGQDDKIWC CKSGEESSRI WTKIKNQVED FLDIILHKGQ
201: VYALDLTGAI WWISLSPLSL LQFTPSIPMD YDGYDSCNKR LVEYCGDLCI IHQLRLKKAY IRRSQRTVGF KVYKMDEYVA KWVEVRSLGD KALIVARDSC
301: FTVVASEYHG CLNNSIYFVD NVRKSVIRMK L

Arabidopsis Description

F-box protein At2g26160 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEZ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.