Factsheet for TraesCS6B01G350200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G298900.1	Wheat	cytosol	91.78	92.29
TraesCS3B01G560700.1	Wheat	cytosol	26.85	24.94
TraesCS3B01G553300.1	Wheat	cytosol	22.47	22.04
TraesCS3B01G562600.1	Wheat	peroxisome	23.29	21.52
TraesCS3B01G560200.1	Wheat	cytosol	23.01	21.48
TraesCS3B01G536000.1	Wheat	cytosol	22.19	21.2
Zm00001d021115_P001	Maize	cytosol	14.79	17.88
Zm00001d021117_P001	Maize	cytosol, plastid	15.34	16.77
Zm00001d021099_P001	Maize	cytosol, vacuole	15.34	16.77
Zm00001d021097_P001	Maize	cytosol	16.16	15.73
TraesCS1B01G127800.1	Wheat	plasma membrane	16.44	15.71
TraesCS3B01G508400.1	Wheat	cytosol	15.34	15.64
Zm00001d021107_P001	Maize	cytosol	15.34	15.38
TraesCS2B01G363100.1	Wheat	cytosol, peroxisome, plastid	14.79	15.3
TraesCS1B01G110300.1	Wheat	cytosol	14.79	15.21
TraesCS3B01G507700.1	Wheat	endoplasmic reticulum, golgi	17.26	14.69
TraesCS3B01G507400.1	Wheat	cytosol	16.16	14.64
TraesCS3B01G560000.1	Wheat	cytosol	15.89	14.39
TraesCS3B01G559900.1	Wheat	cytosol	15.89	14.36
TraesCS3B01G507800.1	Wheat	cytosol, plasma membrane, plastid	15.34	14.25
TraesCS1B01G077100.1	Wheat	cytosol	16.44	14.02
TraesCS6B01G450800.1	Wheat	mitochondrion	15.89	13.27
TraesCS3B01G572600.1	Wheat	peroxisome	11.78	13.19
Zm00001d021103_P001	Maize	cytosol	10.41	12.46
TraesCS5B01G447400.1	Wheat	cytosol, plastid	14.79	11.97
EES02090	Sorghum	cytosol	13.15	11.59
TraesCS6B01G438000.1	Wheat	cytosol, plastid	12.05	10.78
TraesCS4B01G058700.1	Wheat	plastid	12.05	9.93
TraesCS3B01G507200.1	Wheat	cytosol	3.84	7.61
TraesCS3B01G597100.1	Wheat	mitochondrion, plastid	5.48	6.64
TraesCS3B01G585500.1	Wheat	cytosol, mitochondrion	4.93	5.98

Protein Annotations

EnsemblPlants:TraesCS6B01G350200.1	EnsemblPlantsGene:TraesCS6B01G350200	InterPro:DUF295	InterPro:Gal_Oxase/kelch_b-propeller	PANTHER:PTHR33165	PANTHER:PTHR33165:SF11
PFAM:PF03478	SEG:seg	SUPFAM:SSF50965	TMHMM:TMhelix	MapMan:35.2	:

Description

No Description!

Coordinates

chr6B:+:615256342..615257439

Molecular Weight (calculated)

41159.0 Da

IEP (calculated)

8.035

GRAVY (calculated)

0.114

Length

365 amino acids

Sequence
(BLAST)

001: MSCWQSAPAD IICDIGESLL DSNGHDSYVA MRYVCSLWRS AISSYQRLFV RAHRWIVLEE INEFSDCAVH RVLVNLSTGR MVKRRIPLLN DHVYVGSSDG
101: LLILVEKSEP YFVKLWEPFT GYLVQFAAGI IHQQPSHFAV ETHGVPRLFH APGGLRNPQV MCYDVSNGNM EVRFGDMPVE RVASMTAYKS DVFVLFHNRQ
201: LFKITGAGHE MHGEFILIHE APTLAPSAMT HYLVVSGGGN LLIVVIGIAE ILIFCVDVDL RTAVRIYNIG SQALFLSNTR CIAVNAENFP TVKENCVYQA
301: CISGYSGPCG IYEFSLTRPR KRKIYHQSFA NEVTYALGGR PLSMWQVLIH YCLFRNKCRR PLSQV

Best Arabidopsis Sequence Match ( AT4G16080.1 )
(BLAST)

001: MSTSLLIPQR CNTFRMFSSS TTNPFLLHHA IPCGEEAQRT EFLMLDPAKE DYFTTVDKPL PKNLIKSKLV GSSHGWGVYL SSPDYILISN YPSRSKSNPK
101: IIDLPPRPSL NGSQTELVSG VAMSSSPEEE ECIIAVKYMG RPVSIYTPGQ DSQGFLLAMS TRLFDYFEQS KLMYSKRDQR FYMPSSGGHH LWSWVGLPST
201: TPQYHELKFH NLPQFSHSEL QLFDSCYRAH ELVESPSGQR FLLKWYVESP ANKSLVFNCG GTKRFMVFRE EEDMNMCYTE DIGDLCIFLG NNEPFCVKAS
301: SFPGLNPNSI YFLGEGYGVY DIATRSPRSF TPKSTPSSSS EQIVLPYWIP PMSL

Arabidopsis Description

Protein of unknown function (DUF295) [Source:TAIR;Acc:AT4G16080]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.