Factsheet for TraesCS3B01G597100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G585500.1	Wheat	cytosol, mitochondrion	85.71	85.71
TraesCS3B01G507200.1	Wheat	cytosol	17.61	28.8
Zm00001d021115_P001	Maize	cytosol	19.6	19.54
Zm00001d021103_P001	Maize	cytosol	19.27	19.02
Zm00001d021097_P001	Maize	cytosol	23.26	18.67
Zm00001d021117_P001	Maize	cytosol, plastid	20.6	18.56
Zm00001d021107_P001	Maize	cytosol	21.26	17.58
TraesCS3B01G508400.1	Wheat	cytosol	20.6	17.32
Zm00001d021099_P001	Maize	cytosol, vacuole	18.94	17.07
TraesCS3B01G507400.1	Wheat	cytosol	22.26	16.63
TraesCS3B01G572600.1	Wheat	peroxisome	17.28	15.95
TraesCS4B01G058700.1	Wheat	plastid	23.26	15.8
TraesCS1B01G110300.1	Wheat	cytosol	18.6	15.77
TraesCS1B01G127800.1	Wheat	plasma membrane	18.94	14.92
EES02090	Sorghum	cytosol	19.6	14.25
TraesCS3B01G507800.1	Wheat	cytosol, plasma membrane, plastid	17.94	13.74
TraesCS5B01G447400.1	Wheat	cytosol, plastid	20.27	13.53
TraesCS3B01G559900.1	Wheat	cytosol	17.61	13.12
TraesCS1B01G077100.1	Wheat	cytosol	18.6	13.08
TraesCS3B01G560000.1	Wheat	cytosol	17.28	12.9
TraesCS6B01G438000.1	Wheat	cytosol, plastid	17.28	12.75
TraesCS3B01G507700.1	Wheat	endoplasmic reticulum, golgi	17.61	12.35
TraesCS2B01G363100.1	Wheat	cytosol, peroxisome, plastid	14.29	12.18
TraesCS6B01G450800.1	Wheat	mitochondrion	16.28	11.21
TraesCS3B01G560200.1	Wheat	cytosol	10.3	7.93
TraesCS3B01G560700.1	Wheat	cytosol	7.64	5.85
TraesCS3B01G562600.1	Wheat	peroxisome	7.31	5.57
TraesCS3B01G536000.1	Wheat	cytosol	6.98	5.5
TraesCS6B01G350200.1	Wheat	cytosol	6.64	5.48
TraesCS3B01G553300.1	Wheat	cytosol	5.98	4.84

Protein Annotations

EnsemblPlants:TraesCS3B01G597100.1	EnsemblPlantsGene:TraesCS3B01G597100	InterPro:DUF295	PANTHER:PTHR33165	PANTHER:PTHR33165:SF11	PFAM:PF03478
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:819704491..819705396

Molecular Weight (calculated)

34215.7 Da

IEP (calculated)

5.773

GRAVY (calculated)

-0.245

Length

301 amino acids

Sequence
(BLAST)

001: MKVSSAAFLC RSSPSLRLIW DSDRGQPDGY CSLYTADPDS EGFTVYEEED CGYLLQRLAV LGCIGKDGEP LAPLPVAVAE KIFDVVRLPK RDFDFHQALL
101: YAIEMSQITD YDLFQRYGIL ESAGELFLVL KAQHRFKVFR INTDRIVLEP VESIGSRAFF LGRGRYMSVD AHKFPYIDAN CIYYVKSTFP TCDIYKYDLE
201: GEKEERVSQA RHSLNPSTCT LPATIPPFTI LRLLSSYTNS IQTSQLTRCA RIQSVTRSGF KSEYAYEASD PGSCWCLNMI EVVDFQNYPR RPRNGTEVAR
301: P

Best Arabidopsis Sequence Match ( AT5G53790.1 )
(BLAST)

001: MSLLFGLVAK HSVEESDAVR FCSYPRQTPY MLFNCSLGNV DRYSNITISY NIFNPRNEKI IKITDKVFVK SLPDPEQFVL LGTSRSWAAF TRIHDTIIFL
101: TDVFNPWSSE SSTRTITLPP LVSNGIKASV SLSTPSPDDD NDYIVSVSFF RSKLYYCMPN RDSEWTSTNI PFSCDFNSQV VYSRKRQMFY LLTTGCAYIA
201: ALDLKNNKDP TFLQIQFQNF PLIPQHEWEI LASCLRSDYI AESSSGERFI VQWYLTYVVE PWGNGNITKV FRETKRFMVF KEEEEHKFQR RKMIANYTEN
301: IGDLCIFIGR NETFCLEASK YPGLRRNSIY YTGHGFGVYD IRKKSFREYD SNLTKESKLS SISFIAKYQP VSTNRVLGFD

Arabidopsis Description

F-box protein, putative (DUF295) [Source:UniProtKB/TrEMBL;Acc:Q9FHZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.