Factsheet for TraesCS3B01G562600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G497400.1	Wheat	peroxisome	86.84	87.28
TraesCS3B01G553300.1	Wheat	cytosol	56.71	60.22
TraesCS3B01G536000.1	Wheat	cytosol	55.19	57.07
TraesCS3B01G560200.1	Wheat	cytosol	53.92	54.48
TraesCS3B01G560700.1	Wheat	cytosol	30.13	30.28
TraesCS6B01G350200.1	Wheat	cytosol	21.52	23.29
TraesCS3B01G508400.1	Wheat	cytosol	18.48	20.39
TraesCS3B01G507400.1	Wheat	cytosol	20.25	19.85
TraesCS3B01G572600.1	Wheat	peroxisome	15.7	19.02
TraesCS2B01G363100.1	Wheat	cytosol, peroxisome, plastid	16.96	18.98
TraesCS1B01G110300.1	Wheat	cytosol	16.71	18.59
TraesCS3B01G507800.1	Wheat	cytosol, plasma membrane, plastid	17.47	17.56
TraesCS3B01G507700.1	Wheat	endoplasmic reticulum, golgi	18.73	17.25
TraesCS4B01G058700.1	Wheat	plastid	18.99	16.93
TraesCS1B01G127800.1	Wheat	plasma membrane	15.7	16.23
TraesCS5B01G447400.1	Wheat	cytosol, plastid	17.47	15.3
TraesCS1B01G077100.1	Wheat	cytosol	16.46	15.19
TraesCS6B01G450800.1	Wheat	mitochondrion	15.44	13.96
TraesCS3B01G560000.1	Wheat	cytosol	14.18	13.9
TraesCS3B01G559900.1	Wheat	cytosol	14.18	13.86
TraesCS6B01G438000.1	Wheat	cytosol, plastid	13.67	13.24
TraesCS3B01G507200.1	Wheat	cytosol	4.3	9.24
TraesCS3B01G597100.1	Wheat	mitochondrion, plastid	5.57	7.31
TraesCS3B01G585500.1	Wheat	cytosol, mitochondrion	5.06	6.64

Protein Annotations

EnsemblPlants:TraesCS3B01G562600.1

EnsemblPlantsGene:TraesCS3B01G562600

PANTHER:PTHR33165

MapMan:35.2

Description

No Description!

Coordinates

chr3B:+:795812771..795815302

Molecular Weight (calculated)

43307.7 Da

IEP (calculated)

6.830

GRAVY (calculated)

0.105

Length

395 amino acids

Sequence
(BLAST)

001: MKEEEGGCSS QKRRAGWESL QPDLVHLVAD CVLSTGGVDE YMSMRAVCPT WRSAVAKPSP HAAVADLRFR PRQWVLLNGA DDDQGRPLFL HVTTGRFRRL
101: RLSLLHDYIL VGASDGLLVL GDRERPHAAR LLNPLTGDML PFAAPIPPGS RVATTIALAG SEPTIIFSFP QILCKYVLLG GNNAVVYSAD PMGQLCAVKI
201: HDAALKEEES FCLRSMVTCA GNVYVLSLTG MLYKIVWTGG LWYAERILEI EMHYTGALVE SAGKLLVVRV DLGITEFFSV DVERKVLEPL ESIGSCALFL
301: SFGRCMLVDA DKVPSIKGNC TYGSFGGNKF YNMYTRYDLS DAKKENITGP QVPGYLSCLI ADSDIIREGP LSLAQVLLTP CPDVKAQLDR IRCKI

Best Arabidopsis Sequence Match ( AT1G44080.1 )
(BLAST)

001: MGKVGWSDLH EDLIDLLANN LSSNINLLRF RSICKPWRST VATKKRLHNH FERNLPTFKK KKTVVSPSTF FRVTLPSPCR NKGWLIKNRQ VSESSKNNLL
101: SPLSGKTITP SDKTLDLLKV ECFRDSSILQ LFADSDRVVF LDNVFFVVDF KNEIWCCKSG EETRHWTRIN NEEAKGFLDI ILHKGKIYAL DLTGAIWWIS
201: LSELSIYQYG PSTPVDFYEI DNCKEKRLVE YCGELCVVHR FYKKFCVKRV LTERTVCFKV YKMDKNLVEW VEVSSLGDKA LIVATDNCFL VLASEYYGCL
301: ENAIYFNDRE DVSVFKLDDC SIITKQINSS SSSSHQSCFQ MFSTSFF

Arabidopsis Description

Probable F-box protein At1g44080 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6X9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.