Factsheet for TraesCS6B01G438000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G077100.1	Wheat	cytosol	43.14	41.12
TraesCS3B01G508400.1	Wheat	cytosol	34.8	39.66
TraesCS3B01G507700.1	Wheat	endoplasmic reticulum, golgi	39.71	37.76
TraesCS3B01G507200.1	Wheat	cytosol	16.91	37.5
TraesCS2B01G363100.1	Wheat	cytosol, peroxisome, plastid	31.13	35.98
TraesCS3B01G507400.1	Wheat	cytosol	34.8	35.24
TraesCS3B01G507800.1	Wheat	cytosol, plasma membrane, plastid	33.09	34.35
Zm00001d021115_P001	Maize	cytosol	25.0	33.77
Zm00001d021107_P001	Maize	cytosol	28.43	31.87
Zm00001d021099_P001	Maize	cytosol, vacuole	25.0	30.54
Zm00001d021103_P001	Maize	cytosol	21.81	29.18
TraesCS4B01G058700.1	Wheat	plastid	31.62	29.12
Zm00001d021117_P001	Maize	cytosol, plastid	23.77	29.04
Zm00001d021097_P001	Maize	cytosol	25.98	28.27
TraesCS1B01G127800.1	Wheat	plasma membrane	25.49	27.23
TraesCS5B01G447400.1	Wheat	cytosol, plastid	28.19	25.5
EES02090	Sorghum	cytosol	25.25	24.88
TraesCS3B01G572600.1	Wheat	peroxisome	18.63	23.31
TraesCS3B01G560000.1	Wheat	cytosol	22.3	22.58
TraesCS3B01G559900.1	Wheat	cytosol	22.06	22.28
TraesCS1B01G110300.1	Wheat	cytosol	19.12	21.97
TraesCS6B01G450800.1	Wheat	mitochondrion	20.83	19.45
TraesCS3B01G585500.1	Wheat	cytosol, mitochondrion	13.48	18.27
TraesCS3B01G597100.1	Wheat	mitochondrion, plastid	12.75	17.28
TraesCS3B01G560700.1	Wheat	cytosol	14.95	15.52
TraesCS3B01G560200.1	Wheat	cytosol	14.22	14.83
TraesCS3B01G562600.1	Wheat	peroxisome	13.24	13.67
TraesCS3B01G553300.1	Wheat	cytosol	12.25	13.44
TraesCS3B01G536000.1	Wheat	cytosol	11.76	12.57
TraesCS6B01G350200.1	Wheat	cytosol	10.78	12.05

Protein Annotations

EnsemblPlants:TraesCS6B01G438000.1	EnsemblPlantsGene:TraesCS6B01G438000	InterPro:DUF295	PANTHER:PTHR33165	PANTHER:PTHR33165:SF11	PFAM:PF03478
SEG:seg	SUPFAM:SSF101908	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr6B:+:704561347..704562573

Molecular Weight (calculated)

44360.4 Da

IEP (calculated)

8.549

GRAVY (calculated)

0.054

Length

408 amino acids

Sequence
(BLAST)

001: MADPASLATP VSPPAKRKKE DPTPLQTSPL LSPAAAAGWS GLPPDLVRRV ADSLLATNDL DCYVHLRATC PAGAPPPMTL RAAALTVASS RAGGSSSTRS
101: SGARGKTCSC ATPTTGHFLR RKFPMLRDHY AVAATHSGHF VLADKSPPHT VSVLNPLTGA IVRFLVPVPP QMGAADVVFR DGSPLKLVFI CNSSHAQHYT
201: ANPDSQSFTV LDCGPDYNFL LKTGVNGGVY ASLNKAATFA ILITYLAAYH FPPGLSTSML LANVFSGCTY DGDDDRCFLV GLDGHMLLVF RKRTSIFPGV
301: LRFDTVTRQL VPMWSIGRFA IFVGHRRCVA VDADKFPRIE PNCVYFTRHL DRSARIWKYN FNLIQVISED VDFLEHDDQF VLVADRPFTI IHLLSSYGIN
401: MPDSQLPL

Best Arabidopsis Sequence Match ( AT4G25920.1 )
(BLAST)

001: MSKLIINRIF KPSVCKNFLR HANVRLFSSA THTSTKVNQP FSSKPAFPFL LIDYILNNPN SSSDGRVTTN VYGNEKEVLI KDKDLKEEVC DAMTVGFSRD
101: GLRVELCGNH GDVCSPTIFY KPTDPEIEDL TVDLPPLPTG SQIQSLVMSS LPKRDKNWVV VVKLLGSQLS MCRPFGSRKW INIQTKPQNI NPSSSIMFSK
201: KEKKFYVPTP GGNILCYLDP HSEDDDLIDF VELEFDDLPK SVFQELADVS TCSRTDHLVE SPTGQLFLVK WYGEDLEDID NTTLYNVTKK FMVFKEGEKP
301: SCVYTKKMIY TEDIGDLCIF VGHSEAFCVP ASSSPGLKPN CIYFVGYNFG VYDLTTKTCT MFLTKDDNPL RKLEFPYWPP PASFPVLAPN

Arabidopsis Description

Uncharacterized protein At4g25920 [Source:UniProtKB/TrEMBL;Acc:Q8H1S2]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.