Factsheet for TraesCS1B01G110300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G092000.1	Wheat	cytosol	88.17	88.17
TraesCS3B01G507400.1	Wheat	cytosol	33.24	29.28
TraesCS3B01G508400.1	Wheat	cytosol	29.01	28.77
TraesCS3B01G572600.1	Wheat	peroxisome	25.92	28.22
TraesCS1B01G127800.1	Wheat	plasma membrane	28.17	26.18
TraesCS4B01G058700.1	Wheat	plastid	31.27	25.06
TraesCS2B01G363100.1	Wheat	cytosol, peroxisome, plastid	24.51	24.65
TraesCS3B01G507800.1	Wheat	cytosol, plasma membrane, plastid	26.76	24.17
TraesCS3B01G507700.1	Wheat	endoplasmic reticulum, golgi	29.01	24.01
TraesCS5B01G447400.1	Wheat	cytosol, plastid	30.42	23.95
TraesCS1B01G077100.1	Wheat	cytosol	27.89	23.13
TraesCS3B01G560000.1	Wheat	cytosol	25.92	22.83
TraesCS3B01G507200.1	Wheat	cytosol	11.55	22.28
TraesCS3B01G559900.1	Wheat	cytosol	25.35	22.28
TraesCS6B01G450800.1	Wheat	mitochondrion	25.35	20.59
TraesCS6B01G438000.1	Wheat	cytosol, plastid	21.97	19.12
TraesCS3B01G597100.1	Wheat	mitochondrion, plastid	15.77	18.6
TraesCS3B01G553300.1	Wheat	cytosol	18.31	17.47
TraesCS3B01G536000.1	Wheat	cytosol	18.59	17.28
TraesCS3B01G585500.1	Wheat	cytosol, mitochondrion	14.65	17.28
TraesCS3B01G560200.1	Wheat	cytosol	18.87	17.14
TraesCS3B01G562600.1	Wheat	peroxisome	18.59	16.71
TraesCS3B01G560700.1	Wheat	cytosol	17.46	15.78
TraesCS6B01G350200.1	Wheat	cytosol	15.21	14.79

Protein Annotations

EnsemblPlants:TraesCS1B01G110300.1	EnsemblPlantsGene:TraesCS1B01G110300	InterPro:DUF295	PANTHER:PTHR33165	PANTHER:PTHR33165:SF11	PFAM:PF03478
SEG:seg	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:123432751..123433994

Molecular Weight (calculated)

40460.3 Da

IEP (calculated)

6.056

GRAVY (calculated)

-0.240

Length

355 amino acids

Sequence
(BLAST)

001: MASSLPADVV RRLGDIFLDT DDVDYYMTMR GVCHGWRVST DDPKTSPADP RFRLGRWVML DERRPKSDED ERASRRLFLN TTTGRRVYKR LPRLQDYYFV
101: TSTGGLIVLA SRTAPHVVCV MNLFTDSSIS FAAPIPNSVR NTTAYLREVD HFPTLVLDDG PLPDTAYTAK LDSEQFAVEE YNLVDKVRTI WGIDATDREM
201: IGGLMRSITA VLPYKMYFLY TCYHILESAG DMLIVIHRQH PRHGVDVFKV NVEEKVVEPV RSIGSRALFL GQRCVSVETN KFPTIEGNRV FYFGGAEQYD
301: NGVGVYMFDL TNETEKWITS DVHDFSLGFG EHTKPTMIQT LMKYCIDTPW VPTGV

Best Arabidopsis Sequence Match ( AT5G60060.1 )
(BLAST)

001: MDSSSLLPSQ WSDLPLDILE LISDRLDHDS SDTIHLLCLR SVCATWRLSL PLSNKNNRLS KFPKYLPFWS SSSSSSGFFT LKQSNVYKLE APLNPRTCLV
101: KLQETTPGIM RVLDLFSNDR ICFLPENFPS KIDLQEFHVR LVRRTYRMEY ANNGGGAVPC FWSLHSDKVV ILSSGEDSAI IAIHSGGKLG FLKSGNDEKW
201: KILDNSWNVI YEDIMLYKDN RCIVVDDKGK TVIYDVDFKV SDLAEGLVGG GGHKKHLVEC SGGEVFLVDK YVKTVWCKSD ISKSVVEFRV YNLKREEKRW
301: EEVRDLGDVA LFIGDDCSFS VQNPAGDLAG GFIFYSDYRN GGRSRGICSD GDGVFNVDMQ GDFVFSIKPN YFGP

Arabidopsis Description

Putative F-box protein At5g60060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVG8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.