Factsheet for TraesCS3B01G507400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G458200.1	Wheat	plastid	94.79	91.83
TraesCS3A01G463900.1	Wheat	plastid	92.56	89.66
TraesCS3B01G507200.1	Wheat	cytosol	23.82	52.17
Zm00001d021115_P001	Maize	cytosol	33.5	44.7
TraesCS3B01G508400.1	Wheat	cytosol	39.21	44.13
Zm00001d021099_P001	Maize	cytosol, vacuole	33.75	40.72
TraesCS3B01G507800.1	Wheat	cytosol, plasma membrane, plastid	39.7	40.71
Zm00001d021117_P001	Maize	cytosol, plastid	32.75	39.52
Zm00001d021107_P001	Maize	cytosol	35.24	39.01
TraesCS2B01G363100.1	Wheat	cytosol, peroxisome, plastid	33.99	38.81
Zm00001d021097_P001	Maize	cytosol	35.98	38.67
TraesCS3B01G507700.1	Wheat	endoplasmic reticulum, golgi	40.45	38.0
TraesCS4B01G058700.1	Wheat	plastid	41.69	37.92
TraesCS1B01G077100.1	Wheat	cytosol	39.21	36.92
TraesCS1B01G127800.1	Wheat	plasma membrane	33.25	35.08
TraesCS6B01G438000.1	Wheat	cytosol, plastid	35.24	34.8
TraesCS3B01G572600.1	Wheat	peroxisome	27.54	34.05
TraesCS5B01G447400.1	Wheat	cytosol, plastid	37.97	33.92
TraesCS1B01G110300.1	Wheat	cytosol	29.28	33.24
Zm00001d021103_P001	Maize	cytosol	24.81	32.79
EES02090	Sorghum	cytosol	29.78	28.99
TraesCS3B01G560000.1	Wheat	cytosol	25.56	25.56
TraesCS3B01G559900.1	Wheat	cytosol	25.06	25.0
TraesCS6B01G450800.1	Wheat	mitochondrion	25.31	23.34
TraesCS3B01G597100.1	Wheat	mitochondrion, plastid	16.63	22.26
TraesCS3B01G560700.1	Wheat	cytosol	21.59	22.14
TraesCS3B01G585500.1	Wheat	cytosol, mitochondrion	16.38	21.93
TraesCS3B01G562600.1	Wheat	peroxisome	19.85	20.25
TraesCS3B01G553300.1	Wheat	cytosol	18.11	19.62
TraesCS3B01G536000.1	Wheat	cytosol	18.36	19.37
TraesCS3B01G560200.1	Wheat	cytosol	18.61	19.18
TraesCS6B01G350200.1	Wheat	cytosol	14.64	16.16

Protein Annotations

EnsemblPlants:TraesCS3B01G507400.1	EnsemblPlantsGene:TraesCS3B01G507400	InterPro:DUF295	PANTHER:PTHR33165	PANTHER:PTHR33165:SF11	PFAM:PF03478
SEG:seg	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:751013786..751015149

Molecular Weight (calculated)

44439.6 Da

IEP (calculated)

7.313

GRAVY (calculated)

0.075

Length

403 amino acids

Sequence
(BLAST)

001: MAAPAAEAPA PVLPPARRKD ADPARLQTSP LLPAAGWSDL PPDLVRRVAD SLLAANDLDC YMDFRAVCSG WRAATDDPRS DPFDPRFRPR RWVILDDGDD
101: LLLLNAATGR FLRKRIPLLR RYHVLAATPG GFFVLADRYP SRAACVFNPL TVVLIRFAAP VPTKKVAAAT VVFGRSSWPT LTLNLLCNSP SKSYSATPDM
201: ESFQEKEVQL PIDCHISLKA VRGGVYADGG GAAQGFRHGV SVIFEIFDLI QSLHVHPSMF YAEDLPMAGH ANDHTRFFIV EFGGEVLIVI KLQPCVKVFK
301: MDIGSIVPVE SIGSHAIFIG HHRCLAVDTD KFPSVESNCV YYVERLGSSA YICMYNLKDE KDERISAGAV DFVKLHELFI LAAHRPFTII QLLSSYSINA
401: RDS

Best Arabidopsis Sequence Match ( AT4G35733.1 )
(BLAST)

001: MSEATVWSDL PGELLDHIAN GLFSKVELLR FRSICKTFRS AVDSDKNFLD HLKRNRRRLL SPYSTGKTCS LSPAAFYRVV LSSYPDKGWL IKLQDAYVSS
101: QKQLLSPLSR FSIKSSGKTL DLLEFTVSEI HQSYDVEYLY YNSTRASFNF ARVVLAEDFV FIVDNYKKIW LCNSNESDSH WVRIMDEEVK LFSDIVFHKG
201: YMYALDLTGA VWWISLSEFG IFQFGPSSTP MDYCDIDECK DKRFVEYCGD LCIVHRFSRK FRIKRVDIDM TVGFKVYKMD EELVEYVEVK SLGDKAFVMA
301: TDSCFSVLAR EYYGCLENSI YFTEQNNVKV FKLGDGSITN MVDSSFQSCF QMLIPPLV

Arabidopsis Description

F-box protein At4g35733 [Source:UniProtKB/Swiss-Prot;Acc:B3H6C3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.