Factsheet for TraesCS4B01G058700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G058600.1	Wheat	cytosol	68.17	74.94
Zm00001d021115_P001	Maize	cytosol	32.51	47.68
Zm00001d021117_P001	Maize	cytosol, plastid	34.09	45.21
Zm00001d021097_P001	Maize	cytosol	37.25	44.0
Zm00001d021099_P001	Maize	cytosol, vacuole	32.51	43.11
Zm00001d021107_P001	Maize	cytosol	35.21	42.86
TraesCS3B01G507400.1	Wheat	cytosol	37.92	41.69
TraesCS3B01G508400.1	Wheat	cytosol	33.41	41.34
TraesCS3B01G507800.1	Wheat	cytosol, plasma membrane, plastid	35.44	39.95
TraesCS1B01G127800.1	Wheat	plasma membrane	34.09	39.53
Zm00001d021103_P001	Maize	cytosol	26.86	39.02
TraesCS3B01G572600.1	Wheat	peroxisome	28.22	38.34
TraesCS3B01G507200.1	Wheat	cytosol	15.35	36.96
TraesCS5B01G447400.1	Wheat	cytosol, plastid	37.47	36.81
TraesCS2B01G363100.1	Wheat	cytosol, peroxisome, plastid	27.54	34.56
TraesCS3B01G507700.1	Wheat	endoplasmic reticulum, golgi	33.41	34.5
TraesCS1B01G077100.1	Wheat	cytosol	33.18	34.35
TraesCS6B01G438000.1	Wheat	cytosol, plastid	29.12	31.62
TraesCS1B01G110300.1	Wheat	cytosol	25.06	31.27
EES02090	Sorghum	cytosol	29.12	31.16
TraesCS6B01G450800.1	Wheat	mitochondrion	27.09	27.46
TraesCS3B01G560000.1	Wheat	cytosol	24.15	26.55
TraesCS3B01G559900.1	Wheat	cytosol	24.15	26.49
TraesCS3B01G585500.1	Wheat	cytosol, mitochondrion	15.8	23.26
TraesCS3B01G597100.1	Wheat	mitochondrion, plastid	15.8	23.26
TraesCS3B01G560700.1	Wheat	cytosol	17.83	20.1
TraesCS3B01G560200.1	Wheat	cytosol	17.16	19.44
TraesCS3B01G553300.1	Wheat	cytosol	16.25	19.35
TraesCS3B01G562600.1	Wheat	peroxisome	16.93	18.99
TraesCS3B01G536000.1	Wheat	cytosol	15.58	18.06
TraesCS6B01G350200.1	Wheat	cytosol	9.93	12.05

Protein Annotations

EnsemblPlants:TraesCS4B01G058700.1	EnsemblPlantsGene:TraesCS4B01G058700	InterPro:DUF295	PANTHER:PTHR33165	PANTHER:PTHR33165:SF11	PFAM:PF03478
SEG:seg	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:49744682..49746013

Molecular Weight (calculated)

49868.5 Da

IEP (calculated)

4.623

GRAVY (calculated)

-0.085

Length

443 amino acids

Sequence
(BLAST)

001: MHQACTHLAI LQVTKAALKP QSSQPELLQV HPGVLAMAAV DWSSLPCDLV RRVADCFLAA NDVDCYMDLR AVCGSWRSAT DDPKDGPDDP RFRPRQWVVL
101: DDDVFRREDT RLLVNTHTGR FLRKGLPLLG GYRYRYRHVA TALGGFFVLA DYDDYNAARV LNPFTGHMIH FMAKAPSDMV DAAAVIGSPP TLILLCDSDH
201: ALYMADPGST SFALYQDEHA YQLIRLAVAG GMYADGEQRP VPPLPATVAD KIFDLMRLFS VDPSEMFCRD VIERVADDAP EIGHANNSRC FLVQSLGEVL
301: VVFKLRHRME VFRMDSDRGV LEPVKSIGRR AIFVDCYRCL AVDADKFPSV EANCIYHLIG MNPHGDDVYF FDVYKYDLKD GTEEMVSEAI SWSDPLVRWD
401: ADPPFTAVQL LSSYNIEVWD SELVTQEICR VDVDQLVEEE FPI

Best Arabidopsis Sequence Match ( AT2G26160.1 )
(BLAST)

001: MEKPEWSELP GDLINLTANR FSSISDVLRV RSICKPWRSA AATPKSFQCN LPSSNKMIET VLSPTTFFRV TGPSSCSYKG WLIRTKQVSE SSKINLLSPF
101: FRQLLTPSQQ TLDLLKFEVS EIRQSYEIHI FDKYLIQGVI GKEGPSHILS RVVFLDNLIF AVGQDDKIWC CKSGEESSRI WTKIKNQVED FLDIILHKGQ
201: VYALDLTGAI WWISLSPLSL LQFTPSIPMD YDGYDSCNKR LVEYCGDLCI IHQLRLKKAY IRRSQRTVGF KVYKMDEYVA KWVEVRSLGD KALIVARDSC
301: FTVVASEYHG CLNNSIYFVD NVRKSVIRMK L

Arabidopsis Description

F-box protein At2g26160 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEZ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.