Factsheet for TraesCS3B01G507700.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, endoplasmic reticulum

Predictor Summary:

plasma membrane 4
extracellular 4
endoplasmic reticulum 5
vacuole 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G458300.1	Wheat	cytosol	55.94	58.39
TraesCS2B01G363100.1	Wheat	cytosol, peroxisome, plastid	41.96	50.99
TraesCS3B01G508400.1	Wheat	cytosol	40.56	48.6
TraesCS3A01G464100.1	Wheat	plastid	42.89	44.77
TraesCS1B01G077100.1	Wheat	cytosol	42.89	42.99
TraesCS3B01G507800.1	Wheat	cytosol, plasma membrane, plastid	37.3	40.71
TraesCS3B01G507400.1	Wheat	cytosol	38.0	40.45
TraesCS6B01G438000.1	Wheat	cytosol, plastid	37.76	39.71
Zm00001d021115_P001	Maize	cytosol	27.74	39.4
Zm00001d021097_P001	Maize	cytosol	31.7	36.27
Zm00001d021099_P001	Maize	cytosol, vacuole	27.74	35.63
Zm00001d021107_P001	Maize	cytosol	29.6	34.89
Zm00001d021117_P001	Maize	cytosol, plastid	27.04	34.73
TraesCS3B01G507200.1	Wheat	cytosol	14.45	33.7
TraesCS4B01G058700.1	Wheat	plastid	34.5	33.41
TraesCS1B01G127800.1	Wheat	plasma membrane	29.37	32.98
Zm00001d021103_P001	Maize	cytosol	20.75	29.18
TraesCS1B01G110300.1	Wheat	cytosol	24.01	29.01
EES02090	Sorghum	cytosol	26.81	27.78
TraesCS3B01G572600.1	Wheat	peroxisome	20.98	27.61
TraesCS5B01G447400.1	Wheat	cytosol, plastid	28.9	27.49
TraesCS3B01G560000.1	Wheat	cytosol	21.68	23.08
TraesCS3B01G559900.1	Wheat	cytosol	21.45	22.77
TraesCS6B01G450800.1	Wheat	mitochondrion	22.14	21.74
TraesCS3B01G560700.1	Wheat	cytosol	18.65	20.36
TraesCS3B01G562600.1	Wheat	peroxisome	17.25	18.73
TraesCS3B01G560200.1	Wheat	cytosol	17.02	18.67
TraesCS3B01G553300.1	Wheat	cytosol	15.85	18.28
TraesCS3B01G585500.1	Wheat	cytosol, mitochondrion	12.82	18.27
TraesCS3B01G597100.1	Wheat	mitochondrion, plastid	12.35	17.61
TraesCS3B01G536000.1	Wheat	cytosol	15.62	17.54
TraesCS6B01G350200.1	Wheat	cytosol	14.69	17.26

Protein Annotations

EnsemblPlants:TraesCS3B01G507700.1

EnsemblPlantsGene:TraesCS3B01G507700

PANTHER:PTHR33165

PANTHER:PTHR33165:SF11

MapMan:35.2

Description

No Description!

Coordinates

chr3B:-:751510215..751511504

Molecular Weight (calculated)

47572.1 Da

IEP (calculated)

6.736

GRAVY (calculated)

-0.049

Length

429 amino acids

Sequence
(BLAST)

001: MRLLLHFQFS FTLRIFCVFY QALGIWGFPG APMSQQPERA AVTAVPGELP PAKRKKKDPS ISECSPAVPA MATTGWSTLP PDLVRRVADS LLATNDIDCY
101: MAYRAVCSAW RAATDDPRSD ATDPRFRPRR WILLDEVFQS QGKEMLLLTI DTGRFLRKNL PQLGDYHAVA ITHSGYLVLA EKSPPHAARV LNPLTGVVIS
201: FAAPLPPDVG IADVTFPHGT SLRLAVFCDS SGEAYAADPH SESFIRHEYE ERATYDFFRK AAVGGVYARM PYHALLSNFF SSNHLGDPYS LEGFLVGLDG
301: HICVVLKILD PHGEFSLSAF QFDTETGMIC RMKTTGTFAI FIGDRCLAVD TDKFPGTEAN CVYYTDHQGH ICKCNIKDGK MEKISQAADF VKQDKQFVMV
401: ADRPCTIIHF LASYTVNIPD SQLALQQIP

Best Arabidopsis Sequence Match ( AT2G17030.1 )
(BLAST)

001: MVDWSTLPKD LLDLISKSLE SSFDLIQFRS VCSSWRSAAE PKSPLPTHHL PILPDNGGSL FPDSAVGFRL SQRSILLIKP HEPCIESDSF GWLIKVEEDL
101: NVPRKVTLLD PLCDTRNSIP ENFPRVLDMS KFKVRELGRE FKLHYFNTVG DIVESLYLEK AVVKYLDCDG DYKFVLLTIH VSGKLAVFRS WDRAWTVIND
201: MPSPYDDVML FDGRFFAVDN NGRTVVVDYS SLKLTLVASP VFGGDKKFLI ESCGEMLLVD MYLSLEAVEG DPGFVEEIFE HPAFYMNERT VKFKVYRFVE
301: REESWVDVYD LEDKMLFLGD DSTFSASASD ILPLCDGSSV FFNGNVFNGE DLGAMQDRDL GVFDFRSGKI ELVQKLPEYA KLFWPPPPWI TSHARAEDHI
401: GETSSQS

Arabidopsis Description

SKIP23F-box protein SKIP23 [Source:UniProtKB/Swiss-Prot;Acc:Q3EBZ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.